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Pull requests: aqlaboratory/openfold-3

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Pull requests list

Make chunking for Triton kernels closer to cueq safe-to-test Internal only label used to indicate PRs that are ready for automated CI testing.
#209 opened May 2, 2026 by GMNGeoffrey Contributor Loading…
2
Apply power-of-two chunking consistently
#207 opened May 1, 2026 by GMNGeoffrey Contributor Loading…
2
tests: geometry (tier-1) safe-to-test Internal only label used to indicate PRs that are ready for automated CI testing.
#184 opened Apr 16, 2026 by jandom Collaborator Loading…
@jandom
7
Replace scipy's truncnorm.rvs with nn.init.trunc_normal_ to make model load faster safe-to-test Internal only label used to indicate PRs that are ready for automated CI testing.
#178 opened Apr 13, 2026 by rizsp Contributor Loading…
@rizsp
9
Fixes for forkserver/spawn serialization and fix for LMDB upgrade issues safe-to-test Internal only label used to indicate PRs that are ready for automated CI testing.
#148 opened Mar 26, 2026 by christinaflo Collaborator Loading…
@jandom @christinaflo
5
use torch.gather() to make batched_gather() more efficient enhancement New feature or request model Related to the model definition sketch This is an idea/sketch rather than a mergeable PR, significant work needed to advance needed training Relating to the training pipeline
#135 opened Mar 14, 2026 by OccupyMars2030 • Draft
3
Fix organometallic conformer gen and custom CCD support
#132 opened Mar 10, 2026 by ljarosch Collaborator • Draft
2
28
Fix check_sequence filter
#80 opened Dec 28, 2025 by gnikolenyi Collaborator Loading…
1
6
feat(inference): Add support for custom residue numbering (resolves #58)
#69 opened Dec 6, 2025 by chodec Contributor Loading…
16
Cifs direct template structure
#37 opened Nov 12, 2025 by thanhnamitit Loading…
5
Preserve Raw ColabFold MSA Output Files
#35 opened Nov 12, 2025 by qurat-ul-ain95 Contributor Loading…
1
6
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