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This repository was archived by the owner on Apr 3, 2026. It is now read-only.

Releases: alermol/REcomp2

v2.1.3

20 Aug 20:03

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  • Bug with cpu count was fixed

  • Size of REcomp2 was decreased

  • megablast and blastn has been added as options for superclusters identification

  • More accurate 'other' contigs selection algorithm based on artificial similarity index
    For each contig in superclusters will be calculated Similarity Index SI:

                                                  SI = abs(1 - (N / Q * 100))
    

    where N - number of hits for contig with all consensuses in supercluster, Q - maximal query cover per HSP across all HSP of contig. Contig with the smallest SI value will be selected.

v2.1.2-3

16 Aug 06:10

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  • Test data become more lightweight
  • Small bugfixes