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39 changes: 39 additions & 0 deletions noname_tool.py
Original file line number Diff line number Diff line change
Expand Up @@ -130,6 +130,45 @@ def main(input_file, output_file):

with open(output_file, 'w') as fw:
pass

import os
import csv
def write_in_file(parser, cmers, ORF1, ORF2, codons, amino):
parser = {}
GC_amount = {}
n50 = {}
cmers = {}
ORF1 = {}
ORF2 = {}
codons = {}
amino = {}

dicts = parser, GC_amount, n50, cmers, ORF1, ORF2, codons, amino

with open('wril.csv', 'w') as file:
writer = csv.writer(ofile, delimiter='\t')
for key in parser.iterkeys():
writer.writerow([key] + [d[key] for d in dicts])
for key in GC_amount.iterkeys():
writer.writerow([key] + [d[key] for d in dicts])
for key in n50.iterkeys():
writer.writerow([key] + [d[key] for d in dicts])
for key in cmers.iterkeys():
writer.writerow([key] + [d[key] for d in dicts])
for key in ORF1.iterkeys():
writer.writerow([key] + [d[key] for d in dicts])
for key in ORF2.iterkeys():
writer.writerow([key] + [d[key] for d in dicts])
for key in codons.iterkeys():
writer.writerow([key] + [d[key] for d in dicts])
for key in amino.iterkeys():
writer.writerow([key] + [d[key] for d in dicts])
writer.writerow(['parser', 'GC_amount', 'n50', 'cmers', 'ORF1', 'ORF2', 'codons', 'amino'])
file.close()






if __name__ == '__main__':
Expand Down