Skip to content

0.3 #1

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom
Open
adendek wants to merge 8 commits into
base: master
Choose a base branch
from
Open

0.3 #1

adendek wants to merge 8 commits into from

Conversation

@adendek
Copy link
Owner

@adendek adendek commented Jan 19, 2026

Test PR to check if the test are fine.

adendek and others added 8 commits January 18, 2026 20:55
@adendek
refactor: adopt _src pattern and migrate core components
100fddf 
- Restructured the repository to separate internal logic (`pina/_src`) from
  the public API.
- Migrated central components (Graph, LabelTensor, Operator, Trainer) into
  `pina/_src/core/` for better organization.
- Updated all subpackage `__init__.py` files to expose a clean, flat
  import surface for users.
- Standardized module docstrings across Solvers, Models, Equations,
  Domains, and Callbacks to improve documentation quality.
- Optimized internal dictionary handling in tensor storage functions.
@adendek
Fix formatting and failing UT
e5c6147
@adendek
Add error suppression logic fot test
ad8641a
@adendek
Fix missing imports
3bb8a91
@adendek
Fix missing imports
4f9f12c
@adendek
Merge branch 'test_workflow' of https://github.com/adendek/PINA into …
cc24bb3 
…test_workflow
@adendek
Update documentation
9a70520
@adendek
Merge pull request #2 from adendek/test_workflow
f6c680f 
This branch was created to be able to run all tests using on my fork.
@github-actions
Copy link

github-actions bot commented Jan 21, 2026

badge

Code Coverage Summary

Filename                                                                       Stmts    Miss  Cover    Missing
---------------------------------------------------------------------------  -------  ------  -------  ----------------------------------------------------------------------------------------------
__init__.py                                                                        7       0  100.00%
graph.py                                                                           2       0  100.00%
label_tensor.py                                                                    2       0  100.00%
operator.py                                                                        2       0  100.00%
trainer.py                                                                         2       0  100.00%
type_checker.py                                                                    2       0  100.00%
utils.py                                                                           2       0  100.00%
_src/__init__.py                                                                   0       0  100.00%
_src/adaptive_function/__init__.py                                                 0       0  100.00%
_src/adaptive_function/adaptive_function.py                                       55       0  100.00%
_src/adaptive_function/adaptive_function_interface.py                             51       6  88.24%   98, 141, 148-151
_src/callback/__init__.py                                                          0       0  100.00%
_src/callback/optim/__init__.py                                                    0       0  100.00%
_src/callback/optim/switch_optimizer.py                                           23       0  100.00%
_src/callback/optim/switch_scheduler.py                                           21       0  100.00%
_src/callback/processing/__init__.py                                               0       0  100.00%
_src/callback/processing/metric_tracker.py                                        24       3  87.50%   37-38, 68
_src/callback/processing/normalizer_data_callback.py                              68       1  98.53%   141
_src/callback/processing/pina_progress_bar.py                                     26       2  92.31%   90, 93
_src/callback/refinement/__init__.py                                               0       0  100.00%
_src/callback/refinement/r3_refinement.py                                         26       1  96.15%   104
_src/callback/refinement/refinement_interface.py                                  50       5  90.00%   34, 61, 69, 74, 80
_src/condition/__init__.py                                                         0       0  100.00%
_src/condition/condition.py                                                       19       1  94.74%   143
_src/condition/condition_interface.py                                             37       4  89.19%   32, 76, 95, 125
_src/condition/data_condition.py                                                  26       1  96.15%   78
_src/condition/domain_equation_condition.py                                       19       0  100.00%
_src/condition/input_equation_condition.py                                        43       1  97.67%   157
_src/condition/input_target_condition.py                                          44       1  97.73%   172
_src/core/__init__.py                                                              0       0  100.00%
_src/core/graph.py                                                               114      11  90.35%   99-100, 112, 124, 126, 142, 144, 166, 169, 182, 271
_src/core/label_tensor.py                                                        251      24  90.44%   81, 121, 148, 165, 177, 182, 188-193, 273, 280, 332, 348, 444-447, 490, 537, 629, 664-673, 710
_src/core/operator.py                                                             72       2  97.22%   268, 464
_src/core/trainer.py                                                              87       5  94.25%   215-224, 313, 334, 338
_src/core/type_checker.py                                                         22       0  100.00%
_src/core/utils.py                                                                73       7  90.41%   59, 75, 141, 178, 181, 184, 268
_src/data/__init__.py                                                              0       0  100.00%
_src/data/data_module.py                                                         201      22  89.05%   41-52, 132, 172, 193, 232, 313-317, 323-327, 399, 466, 547, 638, 640
_src/data/dataset.py                                                              82       7  91.46%   42, 123-126, 256, 293
_src/domain/__init__.py                                                            0       0  100.00%
_src/domain/base_domain.py                                                        64       0  100.00%
_src/domain/base_operation.py                                                     45       4  91.11%   63, 106, 129, 139
_src/domain/cartesian_domain.py                                                   54       1  98.15%   68
_src/domain/difference.py                                                         27       0  100.00%
_src/domain/domain_interface.py                                                   25       0  100.00%
_src/domain/ellipsoid_domain.py                                                   81       4  95.06%   98, 108-109, 253
_src/domain/exclusion.py                                                          35       1  97.14%   107
_src/domain/intersection.py                                                       34       1  97.06%   97
_src/domain/operation_interface.py                                                 9       0  100.00%
_src/domain/simplex_domain.py                                                     83       5  93.98%   212, 226, 237, 249, 288
_src/domain/union.py                                                              24       0  100.00%
_src/equation/__init__.py                                                          0       0  100.00%
_src/equation/equation.py                                                         16       1  93.75%   59
_src/equation/equation_factory.py                                                112       1  99.11%   178
_src/equation/equation_interface.py                                               14       1  92.86%   51
_src/equation/system_equation.py                                                  21       0  100.00%
_src/loss/__init__.py                                                              0       0  100.00%
_src/loss/linear_weighting.py                                                     14       0  100.00%
_src/loss/loss_interface.py                                                       17       2  88.24%   45, 51
_src/loss/lp_loss.py                                                              15       0  100.00%
_src/loss/ntk_weighting.py                                                        18       0  100.00%
_src/loss/power_loss.py                                                           15       0  100.00%
_src/loss/scalar_weighting.py                                                     16       0  100.00%
_src/loss/self_adaptive_weighting.py                                              12       0  100.00%
_src/loss/weighting_interface.py                                                  29       3  89.66%   35, 41-42
_src/model/__init__.py                                                             0       0  100.00%
_src/model/average_neural_operator.py                                             31       2  93.55%   73, 82
_src/model/deeponet.py                                                            85      13  84.71%   179-182, 201, 232, 271, 281, 291, 301, 311, 321, 476, 486
_src/model/equivariant_graph_neural_operator.py                                   51       1  98.04%   219
_src/model/feed_forward.py                                                        89      11  87.64%   58, 195, 200, 278-292
_src/model/fourier_neural_operator.py                                             78      10  87.18%   100-104, 114, 159-163, 222, 224, 246, 346
_src/model/graph_neural_operator.py                                               40       2  95.00%   58, 60
_src/model/kernel_neural_operator.py                                              34       6  82.35%   83-84, 103-104, 123-124
_src/model/low_rank_neural_operator.py                                            27       2  92.59%   89, 98
_src/model/multi_feed_forward.py                                                  12       5  58.33%   25-31
_src/model/pirate_network.py                                                      28       1  96.43%   119
_src/model/sindy.py                                                               21       0  100.00%
_src/model/spline.py                                                             124       6  95.16%   133, 156, 164, 236, 450, 475
_src/model/spline_surface.py                                                      68      12  82.35%   151-152, 187-190, 200, 213-218, 258
_src/model/block/__init__.py                                                       0       0  100.00%
_src/model/block/average_neural_operator_block.py                                 12       0  100.00%
_src/model/block/convolution.py                                                   64      13  79.69%   77, 81, 85, 91, 97, 111, 114, 151, 161, 171, 181, 191, 201
_src/model/block/convolution_2d.py                                               146      27  81.51%   155, 162, 282, 314, 379-433, 456
_src/model/block/embedding.py                                                     48       7  85.42%   93, 143-146, 155, 168
_src/model/block/fourier_block.py                                                 31       0  100.00%
_src/model/block/gno_block.py                                                     22       4  81.82%   73-77, 87
_src/model/block/integral.py                                                      18       4  77.78%   22-25, 71
_src/model/block/low_rank_block.py                                                24       0  100.00%
_src/model/block/orthogonal.py                                                    37       0  100.00%
_src/model/block/pirate_network_block.py                                          25       1  96.00%   89
_src/model/block/pod_block.py                                                     75      10  86.67%   56-59, 71, 84, 114, 151-156, 191, 216
_src/model/block/rbf_block.py                                                    179      25  86.03%   18, 42, 53, 64, 75, 86, 97, 223, 280, 282, 298, 301, 329, 335, 363, 367, 511-524
_src/model/block/residual.py                                                      46       0  100.00%
_src/model/block/spectral.py                                                      83       4  95.18%   132, 140, 262, 270
_src/model/block/stride.py                                                        28       7  75.00%   55, 58, 61, 67, 72-74
_src/model/block/utils_convolution.py                                             22       3  86.36%   58-60
_src/model/block/message_passing/__init__.py                                       0       0  100.00%
_src/model/block/message_passing/deep_tensor_network_block.py                     21       0  100.00%
_src/model/block/message_passing/en_equivariant_network_block.py                  47       1  97.87%   164
_src/model/block/message_passing/equivariant_graph_neural_operator_block.py       36       0  100.00%
_src/model/block/message_passing/interaction_network_block.py                     23       0  100.00%
_src/model/block/message_passing/radial_field_network_block.py                    20       0  100.00%
_src/optim/__init__.py                                                             0       0  100.00%
_src/optim/optimizer_interface.py                                                  7       0  100.00%
_src/optim/scheduler_interface.py                                                  7       0  100.00%
_src/optim/torch_optimizer.py                                                     14       0  100.00%
_src/optim/torch_scheduler.py                                                     19       2  89.47%   5-6
_src/problem/__init__.py                                                           0       0  100.00%
_src/problem/abstract_problem.py                                                 118      12  89.83%   42-43, 62-68, 147, 159, 177, 251, 255, 284
_src/problem/inverse_problem.py                                                   22       0  100.00%
_src/problem/parametric_problem.py                                                 8       1  87.50%   29
_src/problem/spatial_problem.py                                                    8       0  100.00%
_src/problem/time_dependent_problem.py                                             8       0  100.00%
_src/problem/zoo/__init__.py                                                       0       0  100.00%
_src/problem/zoo/acoustic_wave.py                                                 29       7  75.86%   27-28, 92-96
_src/problem/zoo/advection.py                                                     25       4  84.00%   22, 76-78
_src/problem/zoo/allen_cahn.py                                                    25       3  88.00%   23-25
_src/problem/zoo/diffusion_reaction.py                                            34       5  85.29%   105-115
_src/problem/zoo/helmholtz.py                                                     22       4  81.82%   55, 74-78
_src/problem/zoo/inverse_poisson_2d_square.py                                     50       3  94.00%   49-55
_src/problem/zoo/poisson_2d_square.py                                             16       3  81.25%   57-62
_src/problem/zoo/supervised_problem.py                                            11       0  100.00%
_src/solver/__init__.py                                                            0       0  100.00%
_src/solver/garom.py                                                             108       2  98.15%   130-131
_src/solver/solver.py                                                            190      10  94.74%   195, 218, 290, 293-294, 352, 434, 517, 558, 564
_src/solver/ensemble_solver/__init__.py                                            0       0  100.00%
_src/solver/ensemble_solver/ensemble_pinn.py                                      23       1  95.65%   108
_src/solver/ensemble_solver/ensemble_solver_interface.py                          27       0  100.00%
_src/solver/ensemble_solver/ensemble_supervised.py                                 9       0  100.00%
_src/solver/physics_informed_solver/__init__.py                                    0       0  100.00%
_src/solver/physics_informed_solver/causal_pinn.py                                47       3  93.62%   157, 166-167
_src/solver/physics_informed_solver/competitive_pinn.py                           58       0  100.00%
_src/solver/physics_informed_solver/gradient_pinn.py                              17       0  100.00%
_src/solver/physics_informed_solver/pinn.py                                       18       0  100.00%
_src/solver/physics_informed_solver/pinn_interface.py                             55       2  96.36%   166, 222
_src/solver/physics_informed_solver/rba_pinn.py                                   74       1  98.65%   324
_src/solver/physics_informed_solver/self_adaptive_pinn.py                        103       1  99.03%   393
_src/solver/supervised_solver/__init__.py                                          0       0  100.00%
_src/solver/supervised_solver/reduced_order_model.py                              24       1  95.83%   139
_src/solver/supervised_solver/supervised.py                                        7       0  100.00%
_src/solver/supervised_solver/supervised_solver_interface.py                      25       1  96.00%   90
adaptive_function/__init__.py                                                      3       0  100.00%
callback/__init__.py                                                               7       0  100.00%
condition/__init__.py                                                              7       0  100.00%
data/__init__.py                                                                   3       0  100.00%
domain/__init__.py                                                                11       0  100.00%
equation/__init__.py                                                               4       0  100.00%
loss/__init__.py                                                                   9       0  100.00%
model/__init__.py                                                                 14       0  100.00%
model/block/__init__.py                                                           13       0  100.00%
model/block/message_passing.py                                                     6       0  100.00%
optim/__init__.py                                                                  5       0  100.00%
problem/__init__.py                                                                6       0  100.00%
problem/zoo.py                                                                     9       0  100.00%
solver/__init__.py                                                                16       0  100.00%
TOTAL                                                                           5249     371  92.93%

Results for commit: f6c680f

Minimum allowed coverage is 80.123%

♻️ This comment has been updated with latest results

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

No reviews

Assignees

No one assigned

Labels

None yet

Projects

None yet

Milestone

No milestone

Development

Successfully merging this pull request may close these issues.

2 participants

@adendek