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…screwed up the commit history of the last one.
…ng to work and need a night to think on it
…nterface with testpool and resultrank
… Will modify later. Tests run all the way through.
…them to interact nicely. some work on resultpool, too
This reverts commit 291327d.
…ing and not just testing. grrrr
hypergeometric results use the "p-value" as the test statistic, so we need to rank them in reverse order
fix title issues and cohen's d labeling
lots of small name changes from eggebrecht to uncorrected
This reverts commit 9017f1f.
This reverts commit f1d3b1e.
Fix cohens d for nonperm plotting Co-authored-by: Andy <me@something.com>
* first go at stupid mlapp for plotting * got it working. kind of * seems to be working. finally * fixed export file * trying fix again * Exported mlapp files --------- Co-authored-by: Github Action <action@github.com>
* trying out the sphinx and read the docs * adding more from previous manual and not saving build * added a "getting Started" * added bib * Added citations to methodology overview preface * adding network atlas documentation * trying to make sense of edge level testing
small bug fixes.
fixed roi_centroids
* fixed nesting issue * Exported mlapp files --------- Co-authored-by: Github Action <action@github.com>
variable name corrections
* One small change. remove pointless input * Exported mlapp files --------- Co-authored-by: Github Action <action@github.com>
* added save to trimatrix * remove useless file
* last function change before class * first shot at new brain plots * Finally got brain plots to match original * last function change before class * first shot at new brain plots * Finally got brain plots to match original * adding modal to brain scale * trying to figure out color mapping * some fixes, but still won't work * finally got scaling to work * small changes to app version of brain plots that don't seem to work * Added color scaling to brain plots * added wait bar for scale change * remove app version of brain plot
* fixed legend and got export file going * fixed ranking dropdown * Exported mlapp files --------- Co-authored-by: Github Action <action@github.com>
Expected significance calculation updated to be relative to thresholded p-values, instead of raw p-values. Cases for HG added into Winkler and Westfall-Young ranking. HG's stat is a p-value, and as such, needs to be ranked in the opposite direction than other stats.
* fixes to save summary table * Exported mlapp files --------- Co-authored-by: Github Action <action@github.com>
* eliminate unneeded callback * Exported mlapp files --------- Co-authored-by: Github Action <action@github.com>
* more fixing tests and what causes errors * more fixing tests and what causes errors * fixed test pool test * fixed test pool test * fixed test pool test * fixed test pool test * fixed test pool test * fixed test pool test * may have finally got all this figured * Exported mlapp files --------- Co-authored-by: Github Action <action@github.com>
* intermediate fixes to start testing new things * Exported mlapp files * adding some temp variables for transformation * trying to change git yaml * finished old conversion and plotting * Exported mlapp files * fix nla result * Exported mlapp files --------- Co-authored-by: Github Action <action@github.com>
* [NET-267] Hide and disable cohens D, make cohens D calculations zero. Change edge color map to jet(1000) * Exported mlapp files --------- Co-authored-by: Andy <me@something.com> Co-authored-by: Github Action <action@github.com>
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