Skip to content

[FIX] Find bids files when series number has been mutated #380

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
DESm1th merged 1 commit into from
Feb 11, 2026
Merged

[FIX] Find bids files when series number has been mutated #380

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
10 changes: 10 additions & 0 deletions datman/scan.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -185,6 +185,16 @@ def _find_bids_files(self, file_stem):
return []
if int(series) in self._bids_inventory:
return self._bids_inventory[int(series)]
# dcm2bids sometimes prefixes split file series numbers with '10',
# catch these too
prefixed_series = f"10{series}"
if int(prefixed_series) in self._bids_inventory:
nii_series = [scan.series_num for scan in self.niftis]
if prefixed_series in nii_series:
# If the 10XX series number is present in the nii folder too,
# it's an unrelated scan that just happens to start with 10.
return []
return self._bids_inventory[int(prefixed_series)]
return []

def _make_bids_inventory(self):
Expand Down
Loading