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What type of Pull Request is this? (check all applicable)
Describe your changes in brief
This PR uses the latest best practices for Cobra since we moved to the latest version. This improves the usability of the CLI by requiring some flags be used together, improved error handling and error messages. Added examples and improved CLI documentation for each command and subcommand. Previously autocompletion did not work with cloudfuse, this has now been fixed and autocomplete of commands works. Also adds shorthand for many useful flags. Uses the cmd output environment where possible rather than just printing to std out.
Also updates documentation for the CLI commands.
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