move zotero documenation to platform

.github/workflows/docs.yml

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+name: Deploy Documentation
+
+on:
+  push:
+    branches: [ main ]
+  pull_request:
+    branches: [ main ]
+
+permissions:
+  contents: read
+  pages: write
+  id-token: write
+
+concurrency:
+  group: "pages"
+  cancel-in-progress: false
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v4
+
+    - uses: actions/setup-python@v5
+      with:
+        python-version: 3.x
+
+    - name: Install dependencies
+      run: pip install mkdocs-material
+
+    - name: Build documentation
+      run: mkdocs build
+
+    - name: Upload Pages artifact
+      uses: actions/upload-pages-artifact@v3
+      with:
+        path: site
+
+  deploy:
+    if: github.ref == 'refs/heads/main'
+    needs: build
+    runs-on: ubuntu-latest
+    environment:
+      name: github-pages
+      url: ${{ steps.deployment.outputs.page_url }}
+    steps:
+    - name: Deploy to GitHub Pages
+      id: deployment
+      uses: actions/deploy-pages@v4

docs/assets/stylesheets/science-live.css

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+/* Science Live Brand Colors */
+:root {
+  --sl-navy: #1e3a5f;
+  --sl-pink: #e91e8c;
+  --sl-light-blue: #5fb3d9;
+  --sl-white: #ffffff;
+  --sl-light-pink: #f5a3d0;
+  --sl-dark-pink: #c91677;
+}
+
+/* Primary color scheme - Navy Blue */
+[data-md-color-scheme="default"] {
+  --md-primary-fg-color: var(--sl-navy);
+  --md-primary-fg-color--light: #2d4a6b;
+  --md-primary-fg-color--dark: #152e47;
+  --md-accent-fg-color: var(--sl-pink);
+  --md-accent-fg-color--transparent: rgba(233, 30, 140, 0.1);
+}
+
+/* Dark mode - Keep the navy but adjust for readability */
+[data-md-color-scheme="slate"] {
+  --md-primary-fg-color: var(--sl-navy);
+  --md-primary-fg-color--light: #2d4a6b;
+  --md-primary-fg-color--dark: #152e47;
+  --md-accent-fg-color: var(--sl-light-pink);
+  --md-accent-fg-color--transparent: rgba(245, 163, 208, 0.1);
+}
+
+/* Header styling */
+.md-header {
+  background: linear-gradient(135deg, var(--sl-navy) 0%, #2d4a6b 100%);
+}
+
+/* Tab styling */
+.md-tabs {
+  background: linear-gradient(to right, var(--sl-navy), #2d4a6b);
+}
+
+/* Tab links - WHITE text for good contrast on navy background */
+.md-tabs__item {
+  color: var(--sl-white);
+}
+
+.md-tabs__link {
+  color: var(--sl-white) !important;
+  opacity: 0.8;
+}
+
+.md-tabs__link:hover {
+  color: var(--sl-white) !important;
+  opacity: 1;
+}
+
+.md-tabs__link--active {
+  color: var(--sl-white) !important;
+  opacity: 1;
+  border-bottom: 2px solid var(--sl-pink);
+}
+
+/* Header elements */
+.md-header__title {
+  color: var(--sl-white) !important;
+}
+
+.md-header__button {
+  color: var(--sl-white) !important;
+}
+
+.md-header__source {
+  color: var(--sl-white) !important;
+}
+
+.md-source {
+  color: var(--sl-white) !important;
+}
+
+.md-source__repository {
+  color: var(--sl-white) !important;
+}
+
+.md-source__fact {
+  color: var(--sl-white) !important;
+  opacity: 0.8;
+}
+
+/* MORE PINK ACCENTS */
+
+/* Main headings with pink accent */
+.md-typeset h1 {
+  border-bottom: 3px solid var(--sl-pink);
+  padding-bottom: 0.5rem;
+  color: var(--sl-navy);
+}
+
+/* Secondary headings with pink left border */
+.md-typeset h2 {
+  border-left: 4px solid var(--sl-pink);
+  padding-left: 1rem;
+  color: var(--sl-navy);
+}
+
+/* Third level headings with pink text */
+.md-typeset h3 {
+  color: var(--sl-pink);
+}
+
+/* Bold text in pink */
+.md-typeset strong {
+  color: var(--sl-dark-pink);
+}
+
+/* Table headers with pink background */
+.md-typeset table:not([class]) th {
+  background: linear-gradient(135deg, var(--sl-pink), var(--sl-dark-pink));
+  color: var(--sl-white);
+}
+
+/* Code blocks with pink accents */
+.md-typeset .highlight {
+  border-left: 4px solid var(--sl-pink);
+}
+
+.md-typeset p code,
+.md-typeset li code {
+  background-color: rgba(233, 30, 140, 0.15);
+  color: var(--sl-dark-pink);
+  padding: 0.1em 0.3em;
+  border-radius: 3px;
+}
+
+/* Enhanced buttons */
+.md-button {
+  border: 1px solid var(--sl-pink);
+  color: var(--sl-pink);
+  transition: all 0.3s ease;
+}
+
+.md-button:hover {
+  background-color: var(--sl-pink);
+  color: var(--sl-white);
+  transform: translateY(-1px);
+  box-shadow: 0 4px 12px rgba(233, 30, 140, 0.3);
+}
+
+.md-button--primary {
+  background-color: var(--sl-pink);
+  color: var(--sl-white);
+  border-color: var(--sl-pink);
+}
+
+.md-button--primary:hover {
+  background-color: var(--sl-dark-pink);
+  border-color: var(--sl-dark-pink);
+  transform: translateY(-1px);
+  box-shadow: 0 4px 12px rgba(233, 30, 140, 0.4);
+}
+
+/* Links */
+a {
+  color: var(--sl-pink);
+}
+
+a:hover {
+  color: var(--sl-dark-pink);
+}
+
+/* Navigation */
+.md-nav__item .md-nav__link--active {
+  color: var(--sl-pink);
+  font-weight: bold;
+}
+
+.md-nav__item .md-nav__link:hover {
+  color: var(--sl-light-blue);
+}
+
+/* Admonitions */
+.md-typeset .admonition.tip {
+  border-color: var(--sl-light-blue);
+}
+
+.md-typeset .admonition.tip > .admonition-title {
+  background-color: rgba(95, 179, 217, 0.1);
+  border-color: var(--sl-light-blue);
+}
+
+.md-typeset .admonition.info {
+  border-color: var(--sl-pink);
+}
+
+.md-typeset .admonition.info > .admonition-title {
+  background-color: rgba(233, 30, 140, 0.1);
+  border-color: var(--sl-pink);
+  color: var(--sl-dark-pink);
+}
+
+/* Footer with pink accent */
+.md-footer {
+  background: linear-gradient(135deg, var(--sl-navy) 0%, #152e47 100%);
+  border-top: 3px solid var(--sl-pink);
+}

docs/development/build-process.md

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+# Build Process
+
+Build instructions coming soon.

docs/development/contributing.md

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+# Contributing
+
+Contribution guidelines coming soon.
+
+
+## Install documentation locally
+
+- The first step is to create a python environment:
+
+```
+python3 -m venv sciencelive
+```
+
+- The second step is to activate the sciencelive python environment:
+
+
+```
+source sciencelive/bin/activate
+```
+
+- The third step is to install dependencies:
+
+
+```
+pip install mkdocs-material
+```
+
+- Then you can generate the documentation:
+
+```
+mkdocs build
+```
+
+- And serve it to view it:
+
+```
+mkdocs serve
+```
+
+Open your favorite browser at [http://127.0.0.1:8000/science-live-platform/](http://127.0.0.1:8000/science-live-platform/) to view the documentation.
+

docs/development/testing.md

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+# Testing
+
+Testing guidelines coming soon.

docs/examples/literature-review.md

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+# Literature Review
+
+Example workflow coming soon.

docs/examples/research-collaboration.md

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+# Research Collaboration
+
+Collaborative research example coming soon.

docs/examples/systematic-review.md

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+# Systematic Review
+
+Systematic review workflow coming soon.

docs/examples/video-tutorials.md

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+# Video Tutorials
+
+
+<iframe width="760" height="560" src="https://www.youtube.com/embed/BLeYIeLI6co?start=4&end=24" frameborder="0" allowfullscreen></iframe>
+<iframe width="760" height="560" src="https://www.youtube.com/embed/N4swx_7GXRU" frameborder="0" allowfullscreen></iframe>
+<iframe width="760" height="560" src="https://www.youtube.com/embed/X5BDU0N5sC4" frameborder="0" allowfullscreen></iframe>

docs/getting-started/first-nanopub.md

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+# Create your First Nanopub
+
+Tutorial is coming soon!

docs/getting-started/installation.md

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+# Installation
+
+## Prerequisites
+- Zotero 7.0 or later
+- Active internet connection
+- [ORCID](https://orcid.org) account (required for creating nanopublications)
+
+## Download and Install
+
+1. Download the latest `.xpi` file from [GitHub Releases](https://github.com/ScienceLiveHub/science-live-platform/releases)
+2. In Zotero, go to `Tools > Add-ons`
+3. Drag the `.xpi` file into the Add-ons window
+4. Restart Zotero when prompted
+
+![Nanopub Zotero plugin installation](../assets/images/plugin-installation.png)
+
+Watch the step-by-step installation guide:
+
+<iframe width="760" height="560" src="https://www.youtube.com/embed/BLeYIeLI6co?start=4&end=24" frameborder="0" allowfullscreen></iframe>
+
+
+## Verify Installation
+
+Right-click any item in your Zotero library and look for:
+
+- "Create Nanopublication"
+- "Attach Nanopublication"
+- "Search Related Nanopublications"
+
+![Nanopub Zotero Item Menu](../assets/images/ItemMenu.png){ width="300" }
+
+Similar menu can be found from the "File" tab:
+
+![Nanopub Zotero File Menu](../assets/images/File-menu.png)
+
+If you see these options, the installation was successful!
+
+## Next Steps
+
+- [Quick Start Guide](quick-start.md)