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1 change: 1 addition & 0 deletions doc/source/examples/ADFFrag/ADFFrag.rst
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Expand Up @@ -21,6 +21,7 @@ It simply redirects the usual |AMSResults| methods to the results of the full sy


.. literalinclude:: ../../../../src/scm/plams/recipes/adffragment.py
:language: python

.. include:: ADFFrag.common_header.rst
.. include:: adffrag.ipynb.rst
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3 changes: 2 additions & 1 deletion doc/source/examples/ADFNBO/ADFNBO.rst
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Expand Up @@ -18,7 +18,8 @@ No specialized |Results| subclass is defined for ``ADFNBOJob``.
The source code of the whole module:

.. literalinclude:: ../../../../src/scm/plams/recipes/adfnbo.py
:language: python

.. include:: ADFNBO.common_header.rst
.. include:: ADFNBO.ipynb.rst
.. include:: ADFNBO.common_footer.rst
.. include:: ADFNBO.common_footer.rst
1 change: 1 addition & 0 deletions doc/source/examples/BandFrag/BandFrag.rst
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Expand Up @@ -20,6 +20,7 @@ It simply redirects the usual |AMSResults| methods to the results of the full sy
A derived subclass |NOCVBandFragmentJob| is also provided. It can be usefull for generating NOCV plots after the PEDA-NOCV calculation.

.. literalinclude:: ../../../../src/scm/plams/recipes/bandfragment.py
:language: python

.. include:: BandFrag.common_header.rst
.. include:: bandfrag.ipynb.rst
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3 changes: 2 additions & 1 deletion doc/source/examples/COSMORSCompound/COSMORSCompound.rst
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Expand Up @@ -15,10 +15,11 @@ Source code for ``ADFCOSMORSCompound``
.. dropdown::

.. literalinclude:: ../../../../src/scm/plams/recipes/adfcosmorscompound.py
:language: python

Brief API Documentation
-----------------------

.. automodule:: scm.plams.recipes.adfcosmorscompound
:no-special-members:
:exclude-members: _result_type, __init__, new_children, postrun, _get_radii, adf_settings
:exclude-members: _result_type, __init__, new_children, postrun, _get_radii, adf_settings
3 changes: 2 additions & 1 deletion doc/source/examples/NumGrad/NumGrad.rst
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Expand Up @@ -18,7 +18,8 @@ Any function that takes results of a single point job and returns a single numbe
The source code of the whole module with both abovementioned classes:

.. literalinclude:: ../../../../src/scm/plams/recipes/numgrad.py
:language: python

.. include:: NumGrad.common_header.rst
.. include:: NumGrad.ipynb.rst
.. include:: NumGrad.common_footer.rst
.. include:: NumGrad.common_footer.rst
3 changes: 2 additions & 1 deletion doc/source/examples/NumHess/NumHess.rst
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Expand Up @@ -18,7 +18,8 @@ The returned Hessian can optionally be mass weighted.
The source code of the whole module with both aforementioned classes:

.. literalinclude:: ../../../../src/scm/plams/recipes/numhess.py
:language: python

.. include:: NumHess.common_header.rst
.. include:: NumHess.ipynb.rst
.. include:: NumHess.common_footer.rst
.. include:: NumHess.common_footer.rst
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Expand Up @@ -18,6 +18,7 @@ In this recipe we build a job class ``ReorganizationEnergyJob`` by extending |Mu
In ``ReorganizationEnergyResults``, the reorganization energy is computed by fetching and combining the results from the children jobs.

.. literalinclude:: ../../../../src/scm/plams/recipes/reorganization_energy.py
:language: python


.. include:: ReorganizationEnergy.common_header.rst
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1 change: 1 addition & 0 deletions doc/source/examples/pyAHFCDOS.rst
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Expand Up @@ -8,5 +8,6 @@ The ``FCFDOS`` class allows one to easily calculate the density of states for an
For an example, see :ref:`Vibronic Density of States with ADF<fcf_dos>`.

.. literalinclude:: ../../../src/scm/plams/recipes/fcf_dos.py
:language: python


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