RHESSysIOinR

Overview

RHESSysIOinR contains functions for running RHESSys in R and processing output. The objective of this package is to clearly and efficiently produce R code that can be used to setup RHESSys, conduct calibrations and simulations, and process output. This package supports a long(er)-term goal of having experiments involving RHESSys be reproducible. #OpenScience

Installation

You can install RHESSysIOinR directly from R

# install.packages("devtools")
devtools::install_github("RHESSys/RHESSysIOinR")

Contents

run_rhessys()

The run_rhessys() function is the core method used to setup and run RHESSys. Documentation on how to set up and use the function is contained in the package.

Utilities and helper funcitons

• build_redefine(): generates redefine worldfiles
• cal.wyd(): calculates wateryear day
• change_def_file(): create new def file based on existing file and input pars
• clim_auto(): helper to simplify climate input for run_rhessys()
• evaluation(): used to evaluate model output
• input_tec(): helper to simplify input of tec events
• mkdate(): generates wy, yd, and wyd based on day, month, year
• read_clim(): reads rhessys formatted climate data into R
• readin_rhessys_output(): reads rhessys output into R, includes some subsetting and simply aggregation
• readin_rhessys_output_old(): legacy method to read in rhessys output
• tec_repeat(): generates repeating tec events for input into run_rhessys(), can also copy+rename a redefine file as needed
• write_sample_clim(): generate new climate based on existing climate