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Creating Test Cases with RDP4.101

Status: Open.

#117 In PoonLab/OpenRDP;

· WilliamZekaiWang opened on May 20, 2025

Lots of branches from old issues that could be deleted

Status: Open.

#115 In PoonLab/OpenRDP;

· WilliamZekaiWang opened on May 1, 2025

Error message in the standard error

Status: Open.

#112 In PoonLab/OpenRDP;

· PaulaPrietoOliveira opened on Aug 7, 2024

Run flake8 (and black) on the code?

enhancementNew feature or requestNew feature or request

Status: Open.

#107 In PoonLab/OpenRDP;

· terrycojones opened on Jul 27, 2024

User request: constrain analysis to one parent sequence

enhancementNew feature or requestNew feature or request

Status: Open.

#94 In PoonLab/OpenRDP;

· ArtPoon opened on Jun 10, 2024

Random permutation to generate null distribution

backburnerMaybe address this in the future...Maybe address this in the future...

Status: Open.

#84 In PoonLab/OpenRDP;

· ArtPoon opened on Mar 20, 2024

Check adjustment of p-values for multiple comparisons

bugSomething isn't workingSomething isn't working

Status: Open.

#83 In PoonLab/OpenRDP;

· ArtPoon opened on Mar 20, 2024

Excessive text being printed to console

enhancementNew feature or requestNew feature or request

Status: Open.

#69 In PoonLab/OpenRDP;

· ArtPoon opened on Oct 10, 2023

Refining breakpoints with HMM

backburnerMaybe address this in the future...Maybe address this in the future...

Status: Open.

#56 In PoonLab/OpenRDP;

· ArtPoon opened on Mar 29, 2023

Other metrics to determine which sequence is recombinant

backburnerMaybe address this in the future...Maybe address this in the future...

Status: Open.

#55 In PoonLab/OpenRDP;

· ArtPoon opened on Mar 29, 2023

Reconciling recombination events

backburnerMaybe address this in the future...Maybe address this in the future...

Status: Open.

#54 In PoonLab/OpenRDP;

· ArtPoon opened on Mar 29, 2023

DNA_ALPHABET does not include IUPAC symbols

Status: Open.

#46 In PoonLab/OpenRDP;

· ArtPoon opened on Feb 8, 2023