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AF-CBA-pipeline
AF-CBA-pipeline PublicForked from arupmondal835/AF-CBA-pipeline
3 stage filtering pipeline for finding binding epitopes
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QM_MM_Study_P53-MDM2_Binding
QM_MM_Study_P53-MDM2_Binding PublicInputs for QM, MM and MELD. Structural outputs
Python 3
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Repositories
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This repository provides automation tools for MDDB to streamline data analysis, transfer, and upload workflows.
PDNALab/MDDB-Automator’s past year of commit activity - Biomolecular-Design-with-AI-Perez-Lab Public Forked from alyssablood/Biomolecular-Design-with-AI-Perez-Lab
This repo contains all the information needed to get started in Dr. Perez's lab, including sections on AutoDock, Chimera, BindCraft, AMBER, RFDiffusion, ProteinMPNN, and AlphaFold3.
PDNALab/Biomolecular-Design-with-AI-Perez-Lab’s past year of commit activity - meld-grappa Public Forked from maccallumlab/meld
Integrating Machine Learning Force Field Grappa to MELD
PDNALab/meld-grappa’s past year of commit activity - peptFF-benchmark Public
PDNALab/peptFF-benchmark’s past year of commit activity - MDZip Public
This Git repository contains MDZip, a program that leverages the power of autoencoders with residual connections to compress molecular dynamics trajectories while reconstructing global and local structural properties with minimal information loss.
PDNALab/MDZip’s past year of commit activity - Competitive_binding Public
PDNALab/Competitive_binding’s past year of commit activity - AlphaFolding Public
PDNALab/AlphaFolding’s past year of commit activity
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