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In preparation for #964

@pcmoritz pcmoritz added the tx label Jan 26, 2026
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Code Review

This pull request addresses JAX deprecation warnings by updating jax.make_mesh calls to include axis_types and by replacing .value access with [...] for nnx.Variable and nnx.Param objects. These changes are crucial for maintaining compatibility with newer JAX/Flax versions and ensuring the code continues to function as expected without warnings. A comprehensive security audit found no vulnerabilities, confirming this PR is a clean refactor that improves compatibility without introducing security regressions.

@pcmoritz pcmoritz changed the title [tx] Fix Jax deprecation warnings [tx] Fix Jax deprecation warnings and pin transformers<5 Jan 26, 2026
@pcmoritz pcmoritz merged commit f1be729 into NovaSky-AI:main Jan 26, 2026
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