GEOPY-2574: Speed up active from topography algorithm

environments/py-3.10-linux-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: d5d664277c158311e886351e8bc2c395673c8d474109bf131ed783441dbcccd0
+# input_hash: ab17c66288827773f81f2a03b3a2a35fa5763b2a4744859a382a4b3376dfa9f9
 
 channels:
   - conda-forge
@@ -9,35 +9,46 @@ dependencies:
   - _libgcc_mutex=0.1=conda_forge
   - _openmp_mutex=4.5=2_gnu
   - annotated-types=0.7.0=pyhd8ed1ab_1
-  - astroid=4.0.1=py310hff52083_0
+  - astroid=4.0.2=py310hff52083_0
+  - brotli=1.2.0=h41a2e66_0
+  - brotli-bin=1.2.0=hf2c8021_0
   - bzip2=1.0.8=hda65f42_8
   - c-ares=1.34.5=hb9d3cd8_0
-  - ca-certificates=2025.10.5=hbd8a1cb_0
+  - ca-certificates=2025.11.12=hbd8a1cb_0
   - cached-property=1.5.2=hd8ed1ab_1
   - cached_property=1.5.2=pyha770c72_1
+  - certifi=2025.11.12=pyhd8ed1ab_0
   - colorama=0.4.6=pyhd8ed1ab_1
-  - coverage=7.11.0=py310h3406613_0
+  - contourpy=1.3.2=py310h3788b33_0
+  - coverage=7.12.0=py310h3406613_0
+  - cycler=0.12.1=pyhd8ed1ab_1
   - dill=0.4.0=pyhd8ed1ab_0
   - exceptiongroup=1.3.0=pyhd8ed1ab_0
+  - fonttools=4.60.1=py310h3406613_0
   - freetype=2.14.1=ha770c72_0
   - h5py=3.15.1=nompi_py310h4aa865e_100
   - hdf5=1.14.6=nompi_h6e4c0c1_103
+  - icu=75.1=he02047a_0
   - importlib-metadata=8.7.0=pyhe01879c_1
   - iniconfig=2.3.0=pyhd8ed1ab_0
   - isort=7.0.0=pyhd8ed1ab_0
   - keyutils=1.6.3=hb9d3cd8_0
+  - kiwisolver=1.4.9=py310haaf941d_2
   - krb5=1.21.3=h659f571_0
   - lcms2=2.17=h717163a_0
-  - ld_impl_linux-64=2.44=h1aa0949_4
+  - ld_impl_linux-64=2.45=h1aa0949_0
   - lerc=4.0.0=h0aef613_1
   - libaec=1.1.4=h3f801dc_0
-  - libblas=3.9.0=38_h4a7cf45_openblas
-  - libcblas=3.9.0=38_h0358290_openblas
-  - libcurl=8.16.0=h4e3cde8_0
+  - libblas=3.11.0=1_h4a7cf45_openblas
+  - libbrotlicommon=1.2.0=h09219d5_0
+  - libbrotlidec=1.2.0=hd53d788_0
+  - libbrotlienc=1.2.0=h02bd7ab_0
+  - libcblas=3.11.0=1_h0358290_openblas
+  - libcurl=8.17.0=h4e3cde8_0
   - libdeflate=1.25=h17f619e_0
   - libedit=3.1.20250104=pl5321h7949ede_0
   - libev=4.33=hd590300_2
-  - libexpat=2.7.1=hecca717_0
+  - libexpat=2.7.3=hecca717_0
   - libffi=3.5.2=h9ec8514_0
   - libfreetype=2.14.1=ha770c72_0
   - libfreetype6=2.14.1=h73754d4_0
@@ -47,13 +58,13 @@ dependencies:
   - libgfortran5=15.2.0=hcd61629_7
   - libgomp=15.2.0=h767d61c_7
   - libjpeg-turbo=3.1.2=hb03c661_0
-  - liblapack=3.9.0=38_h47877c9_openblas
+  - liblapack=3.11.0=1_h47877c9_openblas
   - liblzma=5.8.1=hb9d3cd8_2
   - libnghttp2=1.67.0=had1ee68_0
   - libnsl=2.0.1=hb9d3cd8_1
-  - libopenblas=0.3.30=pthreads_h94d23a6_3
+  - libopenblas=0.3.30=pthreads_h94d23a6_4
   - libpng=1.6.50=h421ea60_1
-  - libsqlite=3.50.4=h0c1763c_0
+  - libsqlite=3.51.0=hee844dc_0
   - libssh2=1.11.1=hcf80075_0
   - libstdcxx=15.2.0=h8f9b012_7
   - libstdcxx-ng=15.2.0=h4852527_7
@@ -63,39 +74,45 @@ dependencies:
   - libxcb=1.17.0=h8a09558_0
   - libxcrypt=4.4.36=hd590300_1
   - libzlib=1.3.1=hb9d3cd8_2
+  - matplotlib-base=3.8.4=py310hef631a5_2
   - mccabe=0.7.0=pyhd8ed1ab_1
+  - munkres=1.1.4=pyhd8ed1ab_1
   - ncurses=6.5=h2d0b736_3
   - numpy=1.26.4=py310hb13e2d6_0
   - openjpeg=2.5.4=h55fea9a_0
-  - openssl=3.5.4=h26f9b46_0
+  - openssl=3.6.0=h26f9b46_0
   - packaging=25.0=pyh29332c3_1
   - pillow=10.3.0=py310hebfe307_1
-  - pip=25.2=pyh8b19718_0
+  - pip=25.3=pyh8b19718_0
   - platformdirs=4.5.0=pyhcf101f3_0
   - pluggy=1.6.0=pyhd8ed1ab_0
   - pthread-stubs=0.4=hb9d3cd8_1002
-  - pydantic=2.12.3=pyh3cfb1c2_0
-  - pydantic-core=2.41.4=py310hd8f68c5_0
+  - pydantic=2.12.4=pyh3cfb1c2_0
+  - pydantic-core=2.41.5=py310hd8f68c5_1
   - pygments=2.19.2=pyhd8ed1ab_0
-  - pylint=4.0.2=pyhcf101f3_0
-  - pytest=8.4.2=pyhd8ed1ab_0
+  - pylint=4.0.3=pyhcf101f3_0
+  - pyparsing=3.2.5=pyhcf101f3_0
+  - pytest=9.0.1=pyhcf101f3_0
   - pytest-cov=7.0.0=pyhcf101f3_1
   - python=3.10.19=h3c07f61_2_cpython
+  - python-dateutil=2.9.0.post0=pyhe01879c_2
   - python_abi=3.10=8_cp310
   - pyyaml=6.0.3=py310h3406613_0
   - readline=8.2=h8c095d6_2
   - scipy=1.14.1=py310hfcf56fc_2
   - setuptools=80.9.0=pyhff2d567_0
-  - tk=8.6.13=noxft_hd72426e_102
+  - six=1.17.0=pyhe01879c_1
+  - tk=8.6.13=noxft_ha0e22de_103
   - tomli=2.3.0=pyhcf101f3_0
   - tomlkit=0.13.3=pyha770c72_0
   - typing-extensions=4.15.0=h396c80c_0
   - typing-inspection=0.4.2=pyhd8ed1ab_0
   - typing_extensions=4.15.0=pyhcf101f3_0
   - tzdata=2025b=h78e105d_0
+  - unicodedata2=17.0.0=py310h7c4b9e2_1
   - wheel=0.45.1=pyhd8ed1ab_1
-  - xorg-libxau=1.0.12=hb9d3cd8_0
-  - xorg-libxdmcp=1.1.5=hb9d3cd8_0
+  - xorg-libxau=1.0.12=hb03c661_1
+  - xorg-libxdmcp=1.1.5=hb03c661_1
   - yaml=0.2.5=h280c20c_3
   - zipp=3.23.0=pyhd8ed1ab_0
   - zstd=1.5.7=hb8e6e7a_2

environments/py-3.10-linux-64.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: d5d664277c158311e886351e8bc2c395673c8d474109bf131ed783441dbcccd0
+# input_hash: ab17c66288827773f81f2a03b3a2a35fa5763b2a4744859a382a4b3376dfa9f9
 
 channels:
   - conda-forge
@@ -9,27 +9,38 @@ dependencies:
   - _libgcc_mutex=0.1=conda_forge
   - _openmp_mutex=4.5=2_gnu
   - annotated-types=0.7.0=pyhd8ed1ab_1
+  - brotli=1.2.0=h41a2e66_0
+  - brotli-bin=1.2.0=hf2c8021_0
   - bzip2=1.0.8=hda65f42_8
   - c-ares=1.34.5=hb9d3cd8_0
-  - ca-certificates=2025.10.5=hbd8a1cb_0
+  - ca-certificates=2025.11.12=hbd8a1cb_0
   - cached-property=1.5.2=hd8ed1ab_1
   - cached_property=1.5.2=pyha770c72_1
+  - certifi=2025.11.12=pyhd8ed1ab_0
+  - contourpy=1.3.2=py310h3788b33_0
+  - cycler=0.12.1=pyhd8ed1ab_1
+  - fonttools=4.60.1=py310h3406613_0
   - freetype=2.14.1=ha770c72_0
   - h5py=3.15.1=nompi_py310h4aa865e_100
   - hdf5=1.14.6=nompi_h6e4c0c1_103
+  - icu=75.1=he02047a_0
   - keyutils=1.6.3=hb9d3cd8_0
+  - kiwisolver=1.4.9=py310haaf941d_2
   - krb5=1.21.3=h659f571_0
   - lcms2=2.17=h717163a_0
-  - ld_impl_linux-64=2.44=h1aa0949_4
+  - ld_impl_linux-64=2.45=h1aa0949_0
   - lerc=4.0.0=h0aef613_1
   - libaec=1.1.4=h3f801dc_0
-  - libblas=3.9.0=38_h4a7cf45_openblas
-  - libcblas=3.9.0=38_h0358290_openblas
-  - libcurl=8.16.0=h4e3cde8_0
+  - libblas=3.11.0=1_h4a7cf45_openblas
+  - libbrotlicommon=1.2.0=h09219d5_0
+  - libbrotlidec=1.2.0=hd53d788_0
+  - libbrotlienc=1.2.0=h02bd7ab_0
+  - libcblas=3.11.0=1_h0358290_openblas
+  - libcurl=8.17.0=h4e3cde8_0
   - libdeflate=1.25=h17f619e_0
   - libedit=3.1.20250104=pl5321h7949ede_0
   - libev=4.33=hd590300_2
-  - libexpat=2.7.1=hecca717_0
+  - libexpat=2.7.3=hecca717_0
   - libffi=3.5.2=h9ec8514_0
   - libfreetype=2.14.1=ha770c72_0
   - libfreetype6=2.14.1=h73754d4_0
@@ -39,13 +50,13 @@ dependencies:
   - libgfortran5=15.2.0=hcd61629_7
   - libgomp=15.2.0=h767d61c_7
   - libjpeg-turbo=3.1.2=hb03c661_0
-  - liblapack=3.9.0=38_h47877c9_openblas
+  - liblapack=3.11.0=1_h47877c9_openblas
   - liblzma=5.8.1=hb9d3cd8_2
   - libnghttp2=1.67.0=had1ee68_0
   - libnsl=2.0.1=hb9d3cd8_1
-  - libopenblas=0.3.30=pthreads_h94d23a6_3
+  - libopenblas=0.3.30=pthreads_h94d23a6_4
   - libpng=1.6.50=h421ea60_1
-  - libsqlite=3.50.4=h0c1763c_0
+  - libsqlite=3.51.0=hee844dc_0
   - libssh2=1.11.1=hcf80075_0
   - libstdcxx=15.2.0=h8f9b012_7
   - libstdcxx-ng=15.2.0=h4852527_7
@@ -55,28 +66,35 @@ dependencies:
   - libxcb=1.17.0=h8a09558_0
   - libxcrypt=4.4.36=hd590300_1
   - libzlib=1.3.1=hb9d3cd8_2
+  - matplotlib-base=3.8.4=py310hef631a5_2
+  - munkres=1.1.4=pyhd8ed1ab_1
   - ncurses=6.5=h2d0b736_3
   - numpy=1.26.4=py310hb13e2d6_0
   - openjpeg=2.5.4=h55fea9a_0
-  - openssl=3.5.4=h26f9b46_0
+  - openssl=3.6.0=h26f9b46_0
+  - packaging=25.0=pyh29332c3_1
   - pillow=10.3.0=py310hebfe307_1
-  - pip=25.2=pyh8b19718_0
+  - pip=25.3=pyh8b19718_0
   - pthread-stubs=0.4=hb9d3cd8_1002
-  - pydantic=2.12.3=pyh3cfb1c2_0
-  - pydantic-core=2.41.4=py310hd8f68c5_0
+  - pydantic=2.12.4=pyh3cfb1c2_0
+  - pydantic-core=2.41.5=py310hd8f68c5_1
+  - pyparsing=3.2.5=pyhcf101f3_0
   - python=3.10.19=h3c07f61_2_cpython
+  - python-dateutil=2.9.0.post0=pyhe01879c_2
   - python_abi=3.10=8_cp310
   - readline=8.2=h8c095d6_2
   - scipy=1.14.1=py310hfcf56fc_2
   - setuptools=80.9.0=pyhff2d567_0
-  - tk=8.6.13=noxft_hd72426e_102
+  - six=1.17.0=pyhe01879c_1
+  - tk=8.6.13=noxft_ha0e22de_103
   - typing-extensions=4.15.0=h396c80c_0
   - typing-inspection=0.4.2=pyhd8ed1ab_0
   - typing_extensions=4.15.0=pyhcf101f3_0
   - tzdata=2025b=h78e105d_0
+  - unicodedata2=17.0.0=py310h7c4b9e2_1
   - wheel=0.45.1=pyhd8ed1ab_1
-  - xorg-libxau=1.0.12=hb9d3cd8_0
-  - xorg-libxdmcp=1.1.5=hb9d3cd8_0
+  - xorg-libxau=1.0.12=hb03c661_1
+  - xorg-libxdmcp=1.1.5=hb03c661_1
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
     - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5

environments/py-3.10-win-64-dev.conda.lock.yml

@@ -1,37 +1,47 @@
 # Generated by conda-lock.
 # platform: win-64
-# input_hash: 11bd7a316b2db9ce51c53a95c8c1b1059fd19fa8c274d81e850fb842a3115d6f
+# input_hash: 1f2eb131c401209ac33ec506582e270c15a8e2632f1c4b98931d5ad024bdd4d5
 
 channels:
   - conda-forge
   - nodefaults
 dependencies:
   - _openmp_mutex=4.5=2_gnu
   - annotated-types=0.7.0=pyhd8ed1ab_1
-  - astroid=4.0.1=py310h5588dad_0
+  - astroid=4.0.2=py310h5588dad_0
+  - brotli=1.2.0=h17ff524_0
+  - brotli-bin=1.2.0=h6910e44_0
   - bzip2=1.0.8=h0ad9c76_8
-  - ca-certificates=2025.10.5=h4c7d964_0
+  - ca-certificates=2025.11.12=h4c7d964_0
   - cached-property=1.5.2=hd8ed1ab_1
   - cached_property=1.5.2=pyha770c72_1
+  - certifi=2025.11.12=pyhd8ed1ab_0
   - colorama=0.4.6=pyhd8ed1ab_1
-  - coverage=7.11.0=py310hdb0e946_0
+  - contourpy=1.3.2=py310hc19bc0b_0
+  - coverage=7.12.0=py310hdb0e946_0
+  - cycler=0.12.1=pyhd8ed1ab_1
   - dill=0.4.0=pyhd8ed1ab_0
   - exceptiongroup=1.3.0=pyhd8ed1ab_0
+  - fonttools=4.60.1=py310hdb0e946_0
   - freetype=2.14.1=h57928b3_0
   - h5py=3.15.1=nompi_py310hb7e4da9_100
   - hdf5=1.14.6=nompi_he30205f_103
   - importlib-metadata=8.7.0=pyhe01879c_1
   - iniconfig=2.3.0=pyhd8ed1ab_0
   - isort=7.0.0=pyhd8ed1ab_0
+  - kiwisolver=1.4.9=py310h1e1005b_2
   - krb5=1.21.3=hdf4eb48_0
   - lcms2=2.17=hbcf6048_0
   - lerc=4.0.0=h6470a55_1
   - libaec=1.1.4=h20038f6_0
-  - libblas=3.9.0=38_hf2e6a31_mkl
-  - libcblas=3.9.0=38_h2a3cdd5_mkl
-  - libcurl=8.16.0=h43ecb02_0
+  - libblas=3.11.0=1_hf2e6a31_mkl
+  - libbrotlicommon=1.2.0=hc82b238_0
+  - libbrotlidec=1.2.0=h431afc6_0
+  - libbrotlienc=1.2.0=ha521d6b_0
+  - libcblas=3.11.0=1_h2a3cdd5_mkl
+  - libcurl=8.17.0=h43ecb02_0
   - libdeflate=1.25=h51727cc_0
-  - libexpat=2.7.1=hac47afa_0
+  - libexpat=2.7.3=hac47afa_0
   - libffi=3.5.2=h52bdfb6_0
   - libfreetype=2.14.1=h57928b3_0
   - libfreetype6=2.14.1=hdbac1cb_0
@@ -40,10 +50,10 @@ dependencies:
   - libhwloc=2.12.1=default_h64bd3f2_1002
   - libiconv=1.18=hc1393d2_2
   - libjpeg-turbo=3.1.2=hfd05255_0
-  - liblapack=3.9.0=38_hf9ab0e9_mkl
+  - liblapack=3.11.0=1_hf9ab0e9_mkl
   - liblzma=5.8.1=h2466b09_2
   - libpng=1.6.50=h7351971_1
-  - libsqlite=3.50.4=hf5d6505_0
+  - libsqlite=3.51.0=hf5d6505_0
   - libssh2=1.11.1=h9aa295b_0
   - libtiff=4.7.1=h8f73337_1
   - libwebp-base=1.6.0=h4d5522a_0
@@ -52,44 +62,50 @@ dependencies:
   - libxml2=2.15.1=h5d26750_0
   - libxml2-16=2.15.1=h692994f_0
   - libzlib=1.3.1=h2466b09_2
-  - llvm-openmp=21.1.4=hfa2b4ca_0
+  - llvm-openmp=21.1.6=h4fa8253_0
+  - matplotlib-base=3.8.4=py310hadb10a8_2
   - mccabe=0.7.0=pyhd8ed1ab_1
   - mkl=2025.3.0=hac47afa_454
+  - munkres=1.1.4=pyhd8ed1ab_1
   - numpy=1.26.4=py310hf667824_0
   - openjpeg=2.5.4=h24db6dd_0
-  - openssl=3.5.4=h725018a_0
+  - openssl=3.6.0=h725018a_0
   - packaging=25.0=pyh29332c3_1
   - pillow=10.3.0=py310h3e38d90_1
-  - pip=25.2=pyh8b19718_0
+  - pip=25.3=pyh8b19718_0
   - platformdirs=4.5.0=pyhcf101f3_0
   - pluggy=1.6.0=pyhd8ed1ab_0
   - pthread-stubs=0.4=h0e40799_1002
-  - pydantic=2.12.3=pyh3cfb1c2_0
-  - pydantic-core=2.41.4=py310h034784e_0
+  - pydantic=2.12.4=pyh3cfb1c2_0
+  - pydantic-core=2.41.5=py310h034784e_1
   - pygments=2.19.2=pyhd8ed1ab_0
-  - pylint=4.0.2=pyhcf101f3_0
-  - pytest=8.4.2=pyhd8ed1ab_0
+  - pylint=4.0.3=pyhcf101f3_0
+  - pyparsing=3.2.5=pyhcf101f3_0
+  - pytest=9.0.1=pyhcf101f3_0
   - pytest-cov=7.0.0=pyhcf101f3_1
   - python=3.10.19=hc20f281_2_cpython
+  - python-dateutil=2.9.0.post0=pyhe01879c_2
   - python_abi=3.10=8_cp310
   - pyyaml=6.0.3=py310hdb0e946_0
   - scipy=1.14.1=py310hbd0dde3_2
   - setuptools=80.9.0=pyhff2d567_0
-  - tbb=2022.3.0=hd094cb3_0
-  - tk=8.6.13=h2c6b04d_2
+  - six=1.17.0=pyhe01879c_1
+  - tbb=2022.3.0=hd094cb3_1
+  - tk=8.6.13=h2c6b04d_3
   - tomli=2.3.0=pyhcf101f3_0
   - tomlkit=0.13.3=pyha770c72_0
   - typing-extensions=4.15.0=h396c80c_0
   - typing-inspection=0.4.2=pyhd8ed1ab_0
   - typing_extensions=4.15.0=pyhcf101f3_0
   - tzdata=2025b=h78e105d_0
   - ucrt=10.0.26100.0=h57928b3_0
+  - unicodedata2=17.0.0=py310h29418f3_1
   - vc=14.3=h2b53caa_32
   - vc14_runtime=14.44.35208=h818238b_32
   - vcomp14=14.44.35208=h818238b_32
   - wheel=0.45.1=pyhd8ed1ab_1
-  - xorg-libxau=1.0.12=h0e40799_0
-  - xorg-libxdmcp=1.1.5=h0e40799_0
+  - xorg-libxau=1.0.12=hba3369d_1
+  - xorg-libxdmcp=1.1.5=hba3369d_1
   - yaml=0.2.5=h6a83c73_3
   - zipp=3.23.0=pyhd8ed1ab_0
   - zstd=1.5.7=hbeecb71_2