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77 changes: 66 additions & 11 deletions episodes/02-Wikidata_underlying_concepts.md
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Expand Up @@ -6,16 +6,18 @@ exercises: 10

::::::::::::::::::::::::::::::::::::::: objectives

- Know what a triple is, and relate structure of a Wikidata statement to traditional metadata field structure
- Know how linked data can create more context for patrons/users in library catalogs
- Know how linked data can improve recall in library catalogs?
- Know what a triple is, and relate structure of a Wikidata statement to traditional metadata field structure.
- Know how linked data can create more context for patrons/users in library catalogs.
- Know how linked data can improve recall in library catalogs.
- Be aware of tools and services built on top of Wikidata, such as Scholia and InteractOA.

::::::::::::::::::::::::::::::::::::::::::::::::::

:::::::::::::::::::::::::::::::::::::::: questions

- What is a RDF triple?
- What are the underlying components of RDF?
- What tools and services are built on top of Wikidata?

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![](fig/Data_Structure_Diagram.jpg){alt='A data structure diagram illustrating a possible connection between a list of triples, represented by a data dictionary, and a graph diagram which visualizes the relationships stipulated by the triples.'}

The scale of linked open data on the web can be visualized in the
[Linked Open Data Cloud](https://lod-cloud.net/), which shows the
connections between hundreds of open datasets. Note that this
visualization is updated regularly, so it will look different over time.

![](https://lod-cloud.net/clouds/lod-cloud.svg){alt='Visualization of the Linked Open Data Cloud showing connections between hundreds of open datasets'}

## 2\.2 Conceptual foundations: RDF and Triples

The RDF defines a conceptual data model that is based on the idea of
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::::::::::::::::::::::::::::::::::::::::::::::::::

## 2\.4 Tools and services using Wikidata

Wikidata's open data can be used and reused by anyone. A number of tools
and services have been built on top of Wikidata's database, demonstrating
its value as a linked open data resource.

### The Linked Open Data Cloud

Wikidata is part of a much larger ecosystem of linked open datasets.
The [Linked Open Data Cloud](https://lod-cloud.net/) visualizes the
connections between hundreds of open datasets on the web. Note that
this visualization is updated regularly.

![](https://lod-cloud.net/clouds/lod-cloud.svg){alt='Visualization of the Linked Open Data Cloud showing connections between hundreds of open datasets'}

### Scholia

[Scholia](https://scholia.toolforge.org/) is a tool built on top of
Wikidata that visualizes scholarly profiles and research outputs. It has
no own database but queries Wikidata directly, which means any addition
to Wikidata is immediately reflected in Scholia. It is particularly
useful for librarians working with research information.

:::::::::::::::::::::::::::::::::::::::: challenge

### Explore a Wikidata item and its Scholia profile

**Part 1: Wikidata item**

Go to the Wikidata page of [Donna Haraway (Q253407)](https://www.wikidata.org/wiki/Q253407),
a feminist scholar and philosopher of science.

- What statements can you find?
- What identifiers are listed?
- What links to other Wiki projects do you see?

**Part 2: Scholia profile**

Now go to the Scholia profile of
[Alex Bateman (Q18921408)](https://scholia.toolforge.org/author/Q18921408),
a bioinformatician with many publications in Wikidata.

- How many publications are listed per year?
- What topics does his research cover?
- Who are his most frequent co-authors?
- Can you find the academic tree and citation statistics?

::::::::::::::::::::::::::::::::::::::::::::::::::::

### InteractOA

[InteractOA](https://interactoa.zbmed.de/) is another example of a
web service built on top of Wikidata. It visualizes genomic RNA
interaction networks based on data stored in Wikidata, linked directly
to the open-access articles that describe the evidence for these
interactions. It demonstrates that Wikidata can serve as a sustainable,
open database for specialized scientific knowledge.


:::::::::::::::::::::::::::::::::::::::: keypoints

- Triples are the basic data structure of graph databases, and they are the conceptual structure of Wikidata statements.
- Wikidata items are denoted by a human-readable label and a short description, and a unique identifer that begins with a Q. These items are the subjects of linked Wikidata statements.
- Wikidata items are denoted by a human-readable label and a short description, and a unique identifier that begins with a Q. These items are the subjects of linked Wikidata statements.
- Wikidata defines relationships between items, also known as triple *predicates*, with Wikidata *properties*.
- Wikidata statements can capture library information, such as relationships like creatorship, publication, aboutness, and more.
- Wikidata is part of a larger Linked Open Data ecosystem, and its data can be reused to build tools and services such as Scholia, InteractOA, and others.

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