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KosinskiLab / AlphaPulldown Public

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[codex] fix #42 with query-only skip-MSA feature generation#611

Merged

DimaMolod merged 5 commits intomainKosinskiLab/AlphaPulldown:mainfrom

fix-42-skip-msaKosinskiLab/AlphaPulldown:fix-42-skip-msaCopy head branch name to clipboard

Apr 10, 2026

Conversation Commits5 (5)Checks Files changed

Merged

[codex] fix #42 with query-only skip-MSA feature generation#611
DimaMolod merged 5 commits intomainfrom
fix-42-skip-msa

Commits

Commits on Apr 10, 2026

fix(#42): add skip-MSA feature generation mode
DimaMolod
committed
docs(#42): document the skip-MSA flag
DimaMolod
committed
fix: address skip-MSA review edge cases
DimaMolod
committed
fix(#42): avoid AF2 bulk-db checks in skip-MSA mode
DimaMolod
committed
fix(#42): add RF annotation to skip-MSA stockholm
DimaMolod
committed

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