FTA-165#75

Merged

ianlongden merged 18 commits intomainfrom

Apr 14, 2026

Commits on Apr 7, 2026

feat(FTA-165): split gene group TSV into three separate files

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Commits on Apr 8, 2026

feat(FTA-165): filter gene groups by cvterm type and add is_obsolete to TSV

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feat(FTA-165): gate obsolete gene group export behind ADD_OBSOLETE env var

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docs(FTA-165): add environment variables to -h help output

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docs: add environment variables to -h help output for all retrieval scripts

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fix(FTA-165): add gg_comment and gg_internal_notes to note mapping, fix typo

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feat(FTA-165): split note_dtos into separate TSV columns by type

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debug(FTA-165): add temporary debug output for FBgg0000044 note_dtos

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debug(FTA-165): change grpprop type tally log level from debug to info

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fix: use aliased Cvterm in get_entityprops to fix join ambiguity

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debug(FTA-165): log generated SQL for entityprops query

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debug(FTA-165): count gg_internal_notes in prop_dict after Phase 1

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chore(FTA-165): remove debug statements from entityprops investigation

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Commits on Apr 10, 2026

feat(FTA-165): add xref columns to gene group basic TSV

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