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Add PJM backend support

Status: Open.

#210 In ENCODE-DCC/caper;

· MinamiNaoya opened on Apr 10, 2025

Unable to run ChIP-seq pipeline Docker container on HPC with Slurm (Error: "caper not found")

Status: Open.

#209 In ENCODE-DCC/caper;

· eusoler opened on Apr 4, 2025

Update caper for compatibility with Python 3.12+

Status: Open.

#207 In ENCODE-DCC/caper;

· mihirsamdarshi opened on Mar 28, 2025

caper installs tests into site-packages/tests which is too generic of a name

Status: Open.

#206 In ENCODE-DCC/caper;

· detrout opened on Oct 29, 2024

Compatibility Update for Caper with Google Batch Following Deprecation of Cloud Life Sciences

Status: Open.

#205 In ENCODE-DCC/caper;

· TarjinderSingh opened on May 5, 2024

using slurm-extra-param and the leader job

Status: Open.

#204 In ENCODE-DCC/caper;

· giardine opened on Apr 5, 2024

Setting $SINGULARITY_TMPDIR environment variable

Status: Open.

#203 In ENCODE-DCC/caper;

· miller-alexander opened on Dec 11, 2023

--slurm-extra-param: expected one argument

Status: Open.

#202 In ENCODE-DCC/caper;

· OrangeyO2 opened on Dec 6, 2023

Caper conda forge

Status: Open.

#200 In ENCODE-DCC/caper;

· atb1r21 opened on Aug 18, 2023

Cannot run on lsf system, not sure if exit code 127 is the reason

Status: Open.

#196 In ENCODE-DCC/caper;

· Jixuan-Huang opened on Jul 12, 2023

caper halted

Status: Open.

#195 In ENCODE-DCC/caper;

· zji90 opened on Jun 28, 2023

LSF job parameter error

Status: Open.

#192 In ENCODE-DCC/caper;

· jwtobias opened on Apr 6, 2023