{2025.06}[foss/2025a] scikit-bio 0.7.1.post1 by boegel · Pull Request #1493 · EESSI/software-layer

boegel · 2026-05-04T13:12:25Z

No description provided.

boegel · 2026-05-04T13:13:13Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen2
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/neoverse_v1
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-jsc for:arch=aarch64/nvidia/grace
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-deucalion for:arch=aarch64/a64fx
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-aws-eu-south for:arch=x86_64/amd/zen5

eessi-bot-aws · 2026-05-04T13:13:20Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen2
Building for: x86_64/amd/zen2
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154136

date	job status	comment
May 04 13:13:19 UTC 2026	submitted	job id `154136` awaits release by job manager
May 04 13:13:48 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 13:20:53 UTC 2026	running	job `154136` is running
May 04 13:40:45 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154136.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen2-17779018740.tar.zst` size: 58 MiB (60880953 bytes) entries: 6456 modules under 2025.06/software/linux/x86_64/amd/zen2/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/x86_64/amd/zen2/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/x86_64/amd/zen2/reprod `biom-format/2.1.17-foss-2025a/20260504_132503UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_133730UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_132414UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_133207UTC` other under 2025.06/software/linux/x86_64/amd/zen2 no other files in tarball
May 04 13:40:45 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen2+default P: perf: 438.833 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen2+default P: latency: 1.37 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen2+default P: latency: 2.04 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen2+default P: latency: 0.17 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen2+default P: bandwidth: 7917.13 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154136.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:37:30 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen2-17779018740.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-05-04T13:13:24Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: neoverse_v1
Building for: aarch64/neoverse_v1
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154137

date	job status	comment
May 04 13:13:23 UTC 2026	submitted	job id `154137` awaits release by job manager
May 04 13:13:45 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 13:19:40 UTC 2026	running	job `154137` is running
May 04 13:34:02 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154137.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-neoverse_v1-17779014930.tar.zst` size: 58 MiB (60872474 bytes) entries: 6456 modules under 2025.06/software/linux/aarch64/neoverse_v1/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/aarch64/neoverse_v1/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/aarch64/neoverse_v1/reprod `biom-format/2.1.17-foss-2025a/20260504_132145UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_133119UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_132116UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_132748UTC` other under 2025.06/software/linux/aarch64/neoverse_v1 no other files in tarball
May 04 13:34:02 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:aarch64-neoverse_v1+default P: perf: 977.565 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-neoverse_v1+default P: latency: 1.64 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-neoverse_v1+default P: latency: 5.37 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-neoverse_v1+default P: latency: 0.26 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-neoverse_v1+default P: bandwidth: 28560.33 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154137.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:37:41 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-neoverse_v1-17779014930.tar.zst` to S3 bucket succeeded

eessi-bot-deucalion · 2026-05-04T13:13:25Z

New job on instance eessi-bot-deucalion for repository eessi.io-2025.06-software
Building on: a64fx
Building for: aarch64/a64fx
Job dir: /home/eessibot/new-bot/jobs/2026.05/pr_1493/1193172

date	job status	comment
May 04 13:13:24 UTC 2026	submitted	job id `1193172` awaits release by job manager
May 04 13:14:13 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 13:15:18 UTC 2026	running	job `1193172` is running
May 04 14:24:40 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-1193172.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-a64fx-17779043060.tar.zst` size: 58 MiB (61703096 bytes) entries: 6456 modules under 2025.06/software/linux/aarch64/a64fx/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/aarch64/a64fx/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/aarch64/a64fx/reprod `biom-format/2.1.17-foss-2025a/20260504_133010UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_141701UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_132748UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_135811UTC` other under 2025.06/software/linux/aarch64/a64fx no other files in tarball
May 04 14:24:40 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ SKIP ] (1/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:a64fx+default [Skipping test: nodes in this partition only have 30720 MiB memory available (per node) according to the current ReFrame configuration, but 49152 MiB is needed] [ SKIP ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:a64fx+default [Skipping test: nodes in this partition only have 30720 MiB memory available (per node) according to the current ReFrame configuration, but 49152 MiB is needed] [ OK ] (3/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:a64fx+default P: perf: 557.277 timesteps/s (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:a64fx+default P: latency: 0.9 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:a64fx+default P: bandwidth: 8000.53 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 3/5 test case(s) from 5 check(s) (0 failure(s), 2 skipped, 0 aborted) Details ✅ job output file `slurm-1193172.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:37:35 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-a64fx-17779043060.tar.zst` to S3 bucket succeeded

eessi-bot-aws-eu-south · 2026-05-04T13:13:27Z

New job on instance eessi-bot-aws-eu-south for repository eessi.io-2025.06-software
Building on: amd-zen5
Building for: x86_64/amd/zen5
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/156

date	job status	comment
May 04 13:13:25 UTC 2026	submitted	job id `156` awaits release by job manager
May 04 13:14:12 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 13:20:20 UTC 2026	running	job `156` is running
May 04 13:32:00 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-156.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen5-17779013820.tar.zst` size: 57 MiB (60757738 bytes) entries: 6456 modules under 2025.06/software/linux/x86_64/amd/zen5/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/x86_64/amd/zen5/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/x86_64/amd/zen5/reprod `biom-format/2.1.17-foss-2025a/20260504_132338UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_132929UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_132308UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_132655UTC` other under 2025.06/software/linux/x86_64/amd/zen5 no other files in tarball
May 04 13:32:00 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen5+default P: perf: 1554.918 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen5+default P: latency: 1.28 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen5+default P: latency: 2.9 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen5+default P: latency: 0.17 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen5+default P: bandwidth: 46665.04 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-156.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:37:32 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen5-17779013820.tar.zst` to S3 bucket succeeded

bedroge · 2026-05-04T13:18:00Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-jsc for:arch=aarch64/nvidia/grace

eessi-bot-jsc · 2026-05-04T13:18:09Z

New job on instance eessi-bot-jsc for repository eessi.io-2025.06-software
Building on: nvidia-grace
Building for: aarch64/nvidia/grace
Job dir: /p/project1/ceasybuilders/eessibot/jobs/2026.05/pr_1493/14723593

date	job status	comment
May 04 13:18:07 UTC 2026	submitted	job id `14723593` awaits release by job manager
May 04 13:18:15 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 13:19:26 UTC 2026	running	job `14723593` is running
May 04 13:45:09 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-14723593.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-nvidia-grace-17779018150.tar.gz` size: 66 MiB (70208669 bytes) entries: 6456 modules under 2025.06/software/linux/aarch64/nvidia/grace/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/aarch64/nvidia/grace/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/aarch64/nvidia/grace/reprod `biom-format/2.1.17-foss-2025a/20260504_132803UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_133541UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_132645UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_133224UTC` other under 2025.06/software/linux/aarch64/nvidia/grace no other files in tarball
May 04 13:45:09 UTC 2026	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite produced failures. ReFrame Summary [ FAILED ] Ran 17/29 test case(s) from 29 check(s) (4 failure(s), 12 skipped, 0 aborted) Details ✅ job output file `slurm-14723593.out` ❌ found message matching `ERROR:` ❌ found message matching `[\sFAILED\s].Ran . test case`
May 04 14:37:34 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-nvidia-grace-17779018150.tar.gz` to S3 bucket succeeded

boegel · 2026-05-04T13:54:56Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/generic
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen3
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/amd/zen4
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/haswell
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/skylake_avx512
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/icelake
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/cascadelake
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=x86_64/intel/sapphirerapids
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/neoverse_n1

eessi-bot-aws · 2026-05-04T13:55:04Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: x86_64/generic
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154140

date	job status	comment
May 04 13:55:02 UTC 2026	submitted	job id `154140` awaits release by job manager
May 04 13:56:13 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 14:05:00 UTC 2026	running	job `154140` is running
May 04 14:22:18 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154140.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-generic-17779044100.tar.zst` size: 57 MiB (60697038 bytes) entries: 6456 modules under 2025.06/software/linux/x86_64/generic/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/x86_64/generic/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/x86_64/generic/reprod `biom-format/2.1.17-foss-2025a/20260504_140754UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_141948UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_140716UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_141453UTC` other under 2025.06/software/linux/x86_64/generic no other files in tarball
May 04 14:22:18 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-generic+default P: perf: 456.277 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-generic+default P: latency: 2.33 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-generic+default P: latency: 2.27 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-generic+default P: latency: 0.64 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-generic+default P: bandwidth: 10464.83 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154140.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:37:51 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-generic-17779044100.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-05-04T13:55:09Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen3
Building for: x86_64/amd/zen3
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154141

date	job status	comment
May 04 13:55:07 UTC 2026	submitted	job id `154141` awaits release by job manager
May 04 13:56:01 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 14:02:26 UTC 2026	running	job `154141` is running
May 04 14:17:57 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154141.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen3-17779041530.tar.zst` size: 58 MiB (60868746 bytes) entries: 6456 modules under 2025.06/software/linux/x86_64/amd/zen3/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/x86_64/amd/zen3/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/x86_64/amd/zen3/reprod `biom-format/2.1.17-foss-2025a/20260504_140536UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_141533UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_140457UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_141117UTC` other under 2025.06/software/linux/x86_64/amd/zen3 no other files in tarball
May 04 14:17:57 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen3+default P: perf: 531.098 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen3+default P: latency: 0.83 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen3+default P: latency: 1.25 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen3+default P: latency: 0.17 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen3+default P: bandwidth: 14869.59 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154141.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:38:02 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen3-17779041530.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-05-04T13:55:14Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: amd-zen4
Building for: x86_64/amd/zen4
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154142

date	job status	comment
May 04 13:55:13 UTC 2026	submitted	job id `154142` awaits release by job manager
May 04 13:56:07 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 14:03:42 UTC 2026	running	job `154142` is running
May 04 14:16:30 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154142.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-amd-zen4-17779040350.tar.zst` size: 57 MiB (60779296 bytes) entries: 6456 modules under 2025.06/software/linux/x86_64/amd/zen4/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/x86_64/amd/zen4/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/x86_64/amd/zen4/reprod `biom-format/2.1.17-foss-2025a/20260504_140532UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_141340UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_140502UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_141021UTC` other under 2025.06/software/linux/x86_64/amd/zen4 no other files in tarball
May 04 14:16:30 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-zen4+default P: perf: 1156.438 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-zen4+default P: latency: 1.38 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-zen4+default P: latency: 3.2 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-zen4+default P: latency: 0.15 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-zen4+default P: bandwidth: 13956.46 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154142.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:38:12 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-amd-zen4-17779040350.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-05-04T13:55:19Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-haswell
Building for: x86_64/intel/haswell
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154144

date	job status	comment
May 04 13:55:18 UTC 2026	submitted	job id `154144` awaits release by job manager
May 04 13:56:24 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 14:07:43 UTC 2026	running	job `154144` is running
May 04 14:26:29 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154144.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-haswell-17779046030.tar.zst` size: 57 MiB (60710426 bytes) entries: 6456 modules under 2025.06/software/linux/x86_64/intel/haswell/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/x86_64/intel/haswell/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/x86_64/intel/haswell/reprod `biom-format/2.1.17-foss-2025a/20260504_141122UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_142259UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_141043UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_141812UTC` other under 2025.06/software/linux/x86_64/intel/haswell no other files in tarball
May 04 14:26:29 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-haswell+default P: perf: 458.014 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-haswell+default P: latency: 2.18 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-haswell+default P: latency: 2.27 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-haswell+default P: latency: 0.63 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-haswell+default P: bandwidth: 10394.43 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154144.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:38:23 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-haswell-17779046030.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-05-04T13:55:24Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-skylake_avx512
Building for: x86_64/intel/skylake_avx512
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154146

date	job status	comment
May 04 13:55:22 UTC 2026	submitted	job id `154146` awaits release by job manager
May 04 13:56:35 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 14:11:57 UTC 2026	running	job `154146` is running
May 04 14:29:06 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154146.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-skylake_avx512-17779047690.tar.zst` size: 58 MiB (61029105 bytes) entries: 6456 modules under 2025.06/software/linux/x86_64/intel/skylake_avx512/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/x86_64/intel/skylake_avx512/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/x86_64/intel/skylake_avx512/reprod `biom-format/2.1.17-foss-2025a/20260504_141438UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_142549UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_141402UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_142119UTC` other under 2025.06/software/linux/x86_64/intel/skylake_avx512 no other files in tarball
May 04 14:29:06 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-skylake+default P: perf: 253.493 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-skylake+default P: latency: 1.16 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-skylake+default P: latency: 1.68 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-skylake+default P: latency: 0.25 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-skylake+default P: bandwidth: 10815.93 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154146.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:38:34 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-skylake_avx512-17779047690.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-05-04T13:55:29Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-icelake
Building for: x86_64/intel/icelake
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154148

date	job status	comment
May 04 13:55:27 UTC 2026	submitted	job id `154148` awaits release by job manager
May 04 13:56:29 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 14:09:07 UTC 2026	running	job `154148` is running
May 04 14:23:43 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154148.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-icelake-17779044810.tar.zst` size: 58 MiB (60974029 bytes) entries: 6456 modules under 2025.06/software/linux/x86_64/intel/icelake/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/x86_64/intel/icelake/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/x86_64/intel/icelake/reprod `biom-format/2.1.17-foss-2025a/20260504_141159UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_142105UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_141129UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_141725UTC` other under 2025.06/software/linux/x86_64/intel/icelake no other files in tarball
May 04 14:23:43 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-icelake+default P: perf: 542.278 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-icelake+default P: latency: 1.04 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-icelake+default P: latency: 1.51 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-icelake+default P: latency: 0.23 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-icelake+default P: bandwidth: 12887.39 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154148.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:38:44 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-icelake-17779044810.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-05-04T13:55:34Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-cascadelake
Building for: x86_64/intel/cascadelake
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154150

date	job status	comment
May 04 13:55:33 UTC 2026	submitted	job id `154150` awaits release by job manager
May 04 13:56:19 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 14:06:21 UTC 2026	running	job `154150` is running
May 04 14:26:27 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154150.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-cascadelake-17779045930.tar.zst` size: 58 MiB (61039566 bytes) entries: 6456 modules under 2025.06/software/linux/x86_64/intel/cascadelake/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/x86_64/intel/cascadelake/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/x86_64/intel/cascadelake/reprod `biom-format/2.1.17-foss-2025a/20260504_141007UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_142250UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_140925UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_141739UTC` other under 2025.06/software/linux/x86_64/intel/cascadelake no other files in tarball
May 04 14:26:27 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-cascadelake+default P: perf: 402.135 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-cascadelake+default P: latency: 1.23 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-cascadelake+default P: latency: 1.78 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-cascadelake+default P: latency: 0.28 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-cascadelake+default P: bandwidth: 10193.19 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154150.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:38:55 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-cascadelake-17779045930.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-05-04T13:55:40Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: intel-sapphirerapids
Building for: x86_64/intel/sapphirerapids
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154153

date	job status	comment
May 04 13:55:38 UTC 2026	submitted	job id `154153` awaits release by job manager
May 04 13:56:40 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 14:13:27 UTC 2026	running	job `154153` is running
May 04 14:31:42 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154153.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-x86_64-intel-sapphirerapids-17779049480.tar.zst` size: 58 MiB (60848025 bytes) entries: 6456 modules under 2025.06/software/linux/x86_64/intel/sapphirerapids/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/x86_64/intel/sapphirerapids/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/x86_64/intel/sapphirerapids/reprod `biom-format/2.1.17-foss-2025a/20260504_141621UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_142848UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_141513UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_142228UTC` other under 2025.06/software/linux/x86_64/intel/sapphirerapids no other files in tarball
May 04 14:31:42 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:x86-64-sapphirerapids+default P: perf: 642.159 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:x86-64-sapphirerapids+default P: latency: 1.34 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:x86-64-sapphirerapids+default P: latency: 1.53 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:x86-64-sapphirerapids+default P: latency: 0.29 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:x86-64-sapphirerapids+default P: bandwidth: 14119.52 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154153.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:39:05 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-x86_64-intel-sapphirerapids-17779049480.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-05-04T13:55:45Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154155

date	job status	comment
May 04 13:55:44 UTC 2026	submitted	job id `154155` awaits release by job manager
May 04 13:55:53 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 13:57:52 UTC 2026	running	job `154155` is running
May 04 14:16:28 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154155.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-generic-17779040300.tar.zst` size: 57 MiB (60541104 bytes) entries: 6456 modules under 2025.06/software/linux/aarch64/generic/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/aarch64/generic/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/aarch64/generic/reprod `biom-format/2.1.17-foss-2025a/20260504_135954UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_141330UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_135916UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_140833UTC` other under 2025.06/software/linux/aarch64/generic no other files in tarball
May 04 14:16:28 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:aarch64-generic+default P: perf: 665.191 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-generic+default P: latency: 2.05 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-generic+default P: latency: 5.6 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-generic+default P: latency: 0.28 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-generic+default P: bandwidth: 16290.6 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154155.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:39:16 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-generic-17779040300.tar.zst` to S3 bucket succeeded

eessi-bot-aws · 2026-05-04T13:55:50Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: neoverse_n1
Building for: aarch64/neoverse_n1
Job dir: /project/def-users/SHARED/jobs/2026.05/pr_1493/154157

date	job status	comment
May 04 13:55:49 UTC 2026	submitted	job id `154157` awaits release by job manager
May 04 13:55:56 UTC 2026	released	job awaits launch by Slurm scheduler
May 04 14:02:17 UTC 2026	running	job `154157` is running
May 04 14:22:16 UTC 2026	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-154157.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-neoverse_n1-17779043720.tar.zst` size: 57 MiB (60756786 bytes) entries: 6456 modules under 2025.06/software/linux/aarch64/neoverse_n1/modules/all `biom-format/2.1.17-foss-2025a.lua` `scikit-bio/0.7.1.post1-foss-2025a.lua` `scikit-learn/1.7.0-gfbf-2025a.lua` `statsmodels/0.14.5-gfbf-2025a.lua` software under 2025.06/software/linux/aarch64/neoverse_n1/software `biom-format/2.1.17-foss-2025a` `scikit-bio/0.7.1.post1-foss-2025a` `scikit-learn/1.7.0-gfbf-2025a` `statsmodels/0.14.5-gfbf-2025a` reprod directories under 2025.06/software/linux/aarch64/neoverse_n1/reprod `biom-format/2.1.17-foss-2025a/20260504_140518UTC` `scikit-bio/0.7.1.post1-foss-2025a/20260504_141911UTC` `scikit-learn/1.7.0-gfbf-2025a/20260504_140439UTC` `statsmodels/0.14.5-gfbf-2025a/20260504_141407UTC` other under 2025.06/software/linux/aarch64/neoverse_n1 no other files in tarball
May 04 14:22:16 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/5) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/22Jul2025-foss-2024a-kokkos %scale=1_node /ade8cad7 @BotBuildTests:aarch64-neoverse_n1+default P: perf: 663.966 timesteps/s (r:0, l:None, u:None) [ OK ] (2/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-neoverse_n1+default P: latency: 2.0 us (r:0, l:None, u:None) [ OK ] (3/5) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-neoverse_n1+default P: latency: 5.47 us (r:0, l:None, u:None) [ OK ] (4/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-neoverse_n1+default P: latency: 0.29 us (r:0, l:None, u:None) [ OK ] (5/5) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-neoverse_n1+default P: bandwidth: 16003.12 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-154157.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 04 14:39:26 UTC 2026	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-neoverse_n1-17779043720.tar.zst` to S3 bucket succeeded

{2025.06}[foss/2025a] scikit-bio 0.7.1.post1

21715f9

boegel added the 2025.06-software.eessi.io 2025.06 version of software.eessi.io label May 4, 2026

bedroge approved these changes May 4, 2026

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bedroge added the bot:deploy Ask bot to deploy missing software installations to EESSI label May 4, 2026

bedroge merged commit 7f91f55 into EESSI:main May 4, 2026
73 of 88 checks passed

boegel deleted the EESSI-2025.06-scikit-bio-2025a branch May 5, 2026 06:03

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eessi-bot-aws Bot commented May 4, 2026 •

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eessi-bot-aws Bot commented May 4, 2026 •

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eessi-bot-aws Bot commented May 4, 2026 •

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eessi-bot-aws Bot commented May 4, 2026 •

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eessi-bot-aws Bot commented May 4, 2026 •

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eessi-bot-aws Bot commented May 4, 2026 •

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eessi-bot-aws Bot commented May 4, 2026 •

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