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Doleks995/README.md

David Paul Oleksy

Harvard University undergraduate studying Biology with hands-on experience in research, software systems, and additive manufacturing workflows.

Domains

  • Clinical data analysis, biomarker extraction, and early-stage clinical ML
  • Computational biology, stochastic modeling, and bioinformatics workflows
  • Additive manufacturing systems and rapid prototyping
  • Technical product architecture, operations, and execution

Active Work

PPDM Clinical NLP and Machine Learning (MGH & Broad Institute BioBank)

Extracting Post-Pancreatitis Diabetes Mellitus Features from Clinical Data Using Natural Language Processing and Machine Learning

  • Designing an institution-contained NLP and ML for unstructured clinical documentation
  • Secure data handling with HIPAA-aligned tokenization, de-identification, and access controls
  • Applied data analysis, database structuring, and clinical documentation review

https://davidoleksyproposal.com/


Sebra Health

Clinical trial discovery and patient–trial matching platform

  • Eligibility extraction and rule-based plus probabilistic matching logic
  • Database design, API development, and product-level technical strategy
  • Cross-functional coordination across engineering, clinical, and business stakeholders

Sebra Health


Doleks Labs

Precision additive manufacturing and rapid prototyping

  • Multi-material FDM and SLA manufacturing with emphasis on repeatability, QA, and process control
  • CAD, CAM, and CNC-adjacent DMF for optimal production and manufacturability
  • Business operations, including quoting systems, part tracking, invoicing, and supply chain coordination

Doleks Labs


Technical Stack

Programming and Data
Python, R, SQL, JavaScript, C, C++, Rust, MATLAB
Data analytics, statistical modeling, Monte Carlo methods, Bayesian approaches, and visualization

Computational and Scientific
Bioinformatics, computational modeling, databases, bio-statistics, scientific computing
Scientific Python stack, PyMol, data pipelines, simulation frameworks

Engineering and Systems
3D modeling, SolidWorks, Fusion 360, CAD/CAM, rapid prototyping, mechanical systems
Electronics exposure, device prototyping, product testing

Software and Infrastructure
Flask, Django, REST APIs, Linux, Git/GitHub, software testing, deployment workflows

Research and Operations
Assay development, exposure, lab documentation, scientific writing
Project management, operations, technical leadership, cross-team coordination


Contact

doleksy@mgh.harvard.edu

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