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Releases: DiltheyLab/RSVTyper

v0.5.0

07 Aug 08:55
550369b

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v0.5.0 Pre-release
Pre-release
  • added parameter to choose number of threads used
  • artic minion pipeline is now executed with --normalise 100000 instead of --normalise 200

v0.4.0

06 Jun 09:17
e2426e2

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v0.4.0 Pre-release
Pre-release
  • New reference sequences. References without the 60-nt/72-nt duplication in the G gene are now included.
  • Additional pipeline step: duplication detection. This ensures that the correct reference is chosen (with or without duplication) as choosing the wrong reference has an impact on the generated consensus sequence
  • "no-longshot" was added as a parameter to the artic pipeline. This improves the detection of insertions and deletions.

v0.3.0

26 Mar 08:30
b279ab6

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v0.3.0 Pre-release
Pre-release

All reference sequences were filled up with Ns to match the sequence lengths of the RSV reference sequences NC_038235.1 and NC_001781.1.

v0.2.0

14 Aug 16:24
b073c05

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v0.2.0 Pre-release
Pre-release
  • output less cluttered
  • changed parameter for the path to the scheme directory to a more fitting one

v0.1.0

29 Jul 09:02

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v0.1.0 Pre-release
Pre-release

Test version