Releases: DiltheyLab/RSVTyper
Releases · DiltheyLab/RSVTyper
v0.5.0
- added parameter to choose number of threads used
- artic minion pipeline is now executed with --normalise 100000 instead of --normalise 200
v0.4.0
- New reference sequences. References without the 60-nt/72-nt duplication in the G gene are now included.
- Additional pipeline step: duplication detection. This ensures that the correct reference is chosen (with or without duplication) as choosing the wrong reference has an impact on the generated consensus sequence
- "no-longshot" was added as a parameter to the artic pipeline. This improves the detection of insertions and deletions.
v0.3.0
All reference sequences were filled up with Ns to match the sequence lengths of the RSV reference sequences NC_038235.1 and NC_001781.1.
v0.2.0
- output less cluttered
- changed parameter for the path to the scheme directory to a more fitting one
v0.1.0
Test version