Fix for AIRR data, automatic style changes, and a couple of correction for error messages#328

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vadimnazarov wants to merge 12 commits intoDendrouLab:mainfrom

vadimnazarov:main

Commits on Feb 4, 2025

fix/refactoring: fix the AIRR code; add checks for column names; fix the formatting and argument types where possible; highlight redundant code with ToDos
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add scirpy version for pyproject.toml
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refactoring: style + more verbose and detailed errros in case of file issues
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feat+refactoring: adapt scirpy to 0.19+; some refactoring with imports and style
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refactoring: imports, style, redundant code
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refactoring: style, types, structure
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refactoring: style and error messages
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fix & refactoring: double group_by; style; replace prints with cats
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add some files to gitignore
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Merge branch 'main' of github.com:vadimnazarov/panpipes
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Commits on Mar 5, 2025

Merge branch 'DendrouLab:main' into main
vadimnazarov
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Commits on Mar 6, 2025

fix: fix an error in plotQC.R
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