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@ArthurDeclercq ArthurDeclercq commented Feb 14, 2025

This pull request includes changes to the tests/test_mumble.py file and the addition of a new test data file. The most important changes include adding a new test data file, updating imports, and modifying test cases to use the new data file.

Major changes

  • primarily addition of packaging data, that includes default ptm list and unimod database.
  • Add class method for removing cached ptm database

Test Data Addition:

Test Case Modifications:

  • tests/test_mumble.py: Updated imports to include read_file from psm_utils.io and removed unused imports.
  • tests/test_mumble.py: Modified the test_single_combined_modifcations and test_double_combined_modifcations test cases to use the new test data file and validate the expected peptidoforms and the number of mapped PSMs.

@ArthurDeclercq ArthurDeclercq merged commit 1a14956 into main Aug 14, 2025
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@ArthurDeclercq ArthurDeclercq deleted the update-testing branch August 14, 2025 13:16
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2 participants