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Use Nextflow v25 #99

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Merged
samarth8392 merged 3 commits into from
Jun 3, 2025
Merged

Use Nextflow v25 #99

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6cec83e
fix: load nextflow v25
samarth8392 Jun 3, 2025
4a6826a
chore: Update CHANGELOG.md
samarth8392 Jun 3, 2025
5f41682
chore: Update CHANGELOG.md
samarth8392 Jun 3, 2025
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3 changes: 2 additions & 1 deletion CHANGELOG.md
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Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
## LOGAN development version

- Uses Nextflow v25 for logan run; fixes the bug in stub run in nf v24.10 (see: https://github.com/nextflow-io/nextflow/issues/5456) (#99, @samarth8392)
-
## LOGAN 0.3.1

- Improve help message for `logan run`. (#97, @kelly-sovacool)
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1 change: 1 addition & 0 deletions src/__main__.py
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Expand Up @@ -141,6 +141,7 @@ def run(main_path, output, _mode, force_all, **kwargs):
mode=_mode,
force_all=force_all,
pipeline_name="LOGAN",
hpc_modules="nextflow/25",
**kwargs,
)
finally:
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