fix: improve CLI help & set mode=slurm as default#97
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kelly-sovacool merged 6 commits intomainfrom May 28, 2025
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Changes
--modeis now slurm--mainIssues
see CCBR/CCBR_NextflowTemplate#49
PR Checklist
(
Strikethroughany points that are not applicable.)[ ] Write unit tests for any new features, bug fixes, or other code changes.testing framework not yet implemented[ ] If a new nextflow process is implemented, define the processcontainerandstub.CHANGELOG.mdwith a short description of any user-facing changes and reference the PR number. Guidelines: https://keepachangelog.com/en/1.1.0/