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Bump the pip group across 7 directories with 8 updates #479

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10 changes: 5 additions & 5 deletions src/modules/api/pipeline-task/requirements.txt
100755 → 100644
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@@ -1,16 +1,16 @@
Flask==1.1.2
Flask==2.2.5
backoff==2.2.1
gcloud==0.18.3
google_cloud_secret_manager==2.7.2
google-api-python-client>=2.35.0
google-cloud-datastore==2.2.0
google-cloud-run
gunicorn==20.1.0
gunicorn==22.0.0
python-dotenv==0.19.1
sentry-sdk==1.7.2
sentry-sdk==1.14.0
itsdangerous==2.0.1
pyOpenSSL==22.1.0
Jinja2==3.0.3
Werkzeug==1.0.0
Jinja2==3.1.3
Werkzeug==2.3.8
Flask_SQLAlchemy==2.5.1
SQLAlchemy==1.3.18
8 changes: 4 additions & 4 deletions src/modules/db_operations/requirements.txt
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@@ -1,14 +1,14 @@
backoff==2.2.1
Flask==1.1.2
Flask==2.2.5
Flask_SQLAlchemy==2.5.1
SQLAlchemy==1.3.18
logzero==1.3.1
python-dotenv==0.19.1
itsdangerous==2.0.1
sentry-sdk==1.7.2
sentry-sdk==1.14.0
pg8000
PyYAML>=4.2b1
diskcache==5.4.0
itsdangerous==2.0.1
Jinja2==3.0.3
Werkzeug==1.0.0
Jinja2==3.1.3
Werkzeug==2.3.8
4 changes: 2 additions & 2 deletions src/modules/indel_primer/requirements.txt
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@@ -1,5 +1,5 @@
logzero==1.3.1
python-dotenv==0.19.1
sentry-sdk==1.7.2
sentry-sdk==1.14.0
itsdangerous==2.0.1
Jinja2==3.0.3
Jinja2==3.1.3
6 changes: 3 additions & 3 deletions src/modules/maintenance/requirements.txt
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@@ -1,8 +1,8 @@
Flask==1.1.2
Werkzeug==1.0.0
Flask==2.2.5
Werkzeug==2.3.8
WTForms==2.1
bleach==4.1.0
Jinja2==3.0.3
Jinja2==3.1.3
itsdangerous==2.0.1
pyOpenSSL==22.1.0
gunicorn
12 changes: 6 additions & 6 deletions src/modules/site-v2/requirements.txt
100755 → 100644
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Expand Up @@ -3,7 +3,7 @@ boto3
cachelib
click==6.7
feedgen==0.9.0
Flask==1.1.2
Flask==2.2.5
Flask_Caching==1.3.3
Flask_Compress==1.13
Flask-Dance==3.0.0
Expand All @@ -29,14 +29,14 @@ google_cloud_logging
google-cloud-run
grpcio
gunicorn
httplib2==0.18.0
httplib2==0.19.0
itsdangerous==2.0.1
logzero==1.3.1
Markdown==2.6.11
pandas==1.1.3
peewee==2.10.2
psycopg2-binary>=2.9.1
pyarrow==0.17.1
pyarrow==14.0.1
pyOpenSSL==22.1.0
pytabix
python_dateutil==2.7.3
Expand All @@ -45,14 +45,14 @@ pytz==2017.3
PyYAML>=4.2b1
requests
rich
sentry-sdk==1.7.2
sentry-sdk==1.14.0
setuptools>=40.3.0
scipy
simplejson==3.13.2
SQLAlchemy==1.3.18
unicode_slugify==0.1.3
Werkzeug==1.0.0
Werkzeug==2.3.8
WTForms==2.1
bleach==4.1.0
Jinja2==3.0.3
Jinja2==3.1.3

12 changes: 6 additions & 6 deletions src/modules/site/requirements.txt
100755 → 100644
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Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@ boto3
cachelib
click==6.7
feedgen==0.9.0
Flask==1.1.2
Flask==2.2.5
Flask_Caching==1.3.3
Flask-Dance==3.0.0
Flask_DebugToolbar==0.10.1
Expand All @@ -26,14 +26,14 @@ google-cloud-datastore
google_cloud_logging
grpcio
gunicorn
httplib2==0.18.0
httplib2==0.19.0
itsdangerous==2.0.1
logzero==1.3.1
Markdown==2.6.11
pandas==1.0.5
peewee==2.10.2
psycopg2-binary>=2.9.1
pyarrow==0.17.1
pyarrow==14.0.1
pyOpenSSL==22.1.0
pytabix
python_dateutil==2.6.1
Expand All @@ -42,13 +42,13 @@ pytz==2017.3
PyYAML>=4.2b1
requests
rich
sentry-sdk==1.7.2
sentry-sdk==1.14.0
setuptools>=40.3.0
scipy
simplejson==3.13.2
SQLAlchemy==1.3.18
unicode_slugify==0.1.3
Werkzeug==1.0.0
Werkzeug==2.3.8
WTForms==2.1
bleach==4.1.0
Jinja2==3.0.3
Jinja2==3.1.3
8 changes: 4 additions & 4 deletions src/pkg/caendr/requirements.dev.txt
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@@ -1,7 +1,7 @@
backoff==2.2.1
cachelib
Flask_SQLAlchemy==2.5.1
Flask==1.1.2
Flask==2.2.5
google-api-python-client
google-cloud-datastore
google_cloud_logging
Expand All @@ -18,6 +18,6 @@ pandas
plotly==5.3.0
psycopg2-binary>=2.9.1
python-dotenv==0.19.1
sentry-sdk==1.7.2
Jinja2==3.0.3
Werkzeug==1.0.0
sentry-sdk==1.14.0
Jinja2==3.1.3
Werkzeug==2.3.8
6 changes: 3 additions & 3 deletions src/pkg/caendr/setup.py
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Expand Up @@ -9,7 +9,7 @@
'cachelib',
'cyvcf2==0.30.22',
'Flask_SQLAlchemy==2.5.1',
'Flask==1.1.2',
'Flask==2.2.5',
'protobuf==3.20.2',
'google-cloud-appengine-logging==0.1.0',
'google_cloud_audit_log==0.2.5',
Expand All @@ -24,7 +24,7 @@
'gtfparse==0.0.6',
'logzero==1.3.1',
'oauth2client',
'numpy==1.19.5',
'numpy==1.22.0',
'pandas==1.1.3',
'plotly==5.3.0',
'psycopg2-binary>=2.9.1',
Expand All @@ -33,6 +33,6 @@
'pytabix==0.1',
'importlib; python_version == "3.8.10"',
'scipy',
'Werkzeug==1.0.0'
'Werkzeug==2.3.8'
],
)