Sdf preprocessing #80
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added 2 commits
December 13, 2024 10:43
fatwir
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Dec 13, 2024
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All the three commands worked - the one for computing the bounds is taking quite some time to process and this should be fine I believe!
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This PR cleans up SDF generation scripts.
To generate scaled segs, meshes, and SDFs for the NPM1 dataset, run
python image_sdfs.py --save_path "./test_img/" --manifest ""../../../../../morphology_appropriate_representation_learning/preprocessed_data/npm1/manifest.csv" --vox_resolution 32 --debug True --global_path "../../../../../"To get the max bounding box of the scaled segs, run
python get_max_bounding_box.py --save_path './test_img/' --manifest ""../../../../../morphology_appropriate_representation_learning/preprocessed_data/npm1/manifest.csv" --global_path "../../../../../"To generate SDF point clouds, run
python pc_sdfs.py --save_path "./test_pcs/" --scaled_mesh_path "./test_img/outputs_mesh/" --vox_resolution 32