mycotools/pyproject.toml at master · xonq/mycotools · GitHub

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[build-system]
requires = ["setuptools", "setuptools-scm"]
build-backend = "setuptools.build_meta"

[project]
name = "mycotools"
version = "1.0.0"
authors = [{name="Zachary Konkel", email="konkelzach@protonmail.com"}]
description = "Comparative genomics automation and standardization software"
readme = "README.md"
license = {file = "LICENSE"}
requires-python = '>=3.0,<4'
dependencies = ['biopython', 'pandas', 'requests', 'scipy', 'openpyxl', 'tqdm',
                'cryptography', 'ete3', 'pyqt5']
classifiers = [
    "Programming Language :: Python :: 3",
    "License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+)",
    "Operating System :: POSIX :: Linux",
]

[project.urls]
"Homepage" = "https://github.com/xonq/mycotools"
"Bug Tracker" = "https://github.com/xonq/mycotools/issues"

[project.scripts]
mtdb = "mycotools.mtdb:main"
acc2fa = "mycotools.acc2fa:cli"
acc2gbk = "mycotools.acc2gbk:cli"
acc2gff = "mycotools.acc2gff:cli"
acc2locus = "mycotools.acc2locus:cli"
add2gff = "mycotools.add2gff:cli"
annotationStats = "mycotools.annotationStats:cli"
assemblyStats = "mycotools.assemblyStats:cli"
bioreform = "mycotools.bioreform:cli"
coords2fa = "mycotools.coords2fa:cli"
crap = "mycotools.crap:cli"
db2files = "mycotools.db2files:cli"
db2hgs = "mycotools.db2hgs:cli"
db2microsyntree = "mycotools.db2microsyntree:cli"
db2search = "mycotools.db2search:cli"
extract_mtdb = "mycotools.extract_mtdb:cli"
fa2clus = "mycotools.fa2clus:cli"
fa2hmmer2fa = "mycotools.fa2hmmer2fa:cli"
fa2mass = "mycotools.fa2mass:cli"
fa2tree = "mycotools.fa2tree:cli"
fna2faa = "mycotools.fna2faa:cli"
gff2seq = "mycotools.gff2seq:cli"
gff2svg = "mycotools.gff2svg:cli"
jgiDwnld = "mycotools.jgiDwnld:cli"
manage_mtdb = "mycotools.manage_mtdb:cli"
ncbiAcc2fa = "mycotools.ncbiAcc2fa:cli"
ncbiDwnld = "mycotools.ncbiDwnld:cli"
ome2name = "mycotools.ome2name:cli"
predb2mtdb = "mycotools.predb2mtdb:cli"
s2subs = "mycotools.s2subs:cli"
update_mtdb = "mycotools.update_mtdb:cli"


[tool.setuptools.packages.find]
include = ["mycotools*"]  # package names should match these glob patterns (["*"] by default)
exclude = ["dist*", "archive*"]  # exclude packages matching these glob patterns (empty by default)