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Add USGS aerial wildlife release download and FathomNet CSV export.#22

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Add USGS aerial wildlife release download and FathomNet CSV export.#22
bw4sz wants to merge 2 commits into
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usgs-aerial-release-download

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@bw4sz bw4sz commented Apr 30, 2026

ScienceBase item 658da7c1d34e3265ab14bb00 (DOI 10.5066/P9CBZQV1): script fetches manifest JSON, downloads annotations and FGDC metadata by default, optional codebase and imagery with S3 request URL hint. --peek-schema prints COCO layout from train/train.json inside the annotations zip.

coco_to_fathomnet_localizations maps COCO bbox xywh to FathomNet CSV columns for public-hosted patch URLs (e.g. HiPerGator /orange/ewhite/web/public).

Made-with: Cursor

bw4sz and others added 2 commits April 29, 2026 15:54
ScienceBase item 658da7c1d34e3265ab14bb00 (DOI 10.5066/P9CBZQV1): script fetches
manifest JSON, downloads annotations and FGDC metadata by default, optional
codebase and imagery with S3 request URL hint. --peek-schema prints COCO layout
from train/train.json inside the annotations zip.

coco_to_fathomnet_localizations maps COCO bbox xywh to FathomNet CSV columns for
public-hosted patch URLs (e.g. HiPerGator /orange/ewhite/web/public).

Made-with: Cursor
Adds --limit N to sample the first N images (useful for pilot submissions).
Updates docstring with concrete HPC paths:
- Imagery: /orange/ewhite/web/public/BOEM/usgs/images/ → https://data.rc.ufl.edu/pub/ewhite/BOEM/usgs/images/
- Annotations: data/usgs_P9CBZQV1/annotations_extracted/annotations/{train,eval,test}/

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
@bw4sz bw4sz closed this May 22, 2026
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