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Changelog

[0.2.3] - 2020/01/20

Added

  • Added support for BED files without comma terminator in fields 11 and 12 (@camillaugolini-iit)
  • Added --transcript_feature_name argument for gtf2bed (@camillaugolini-iit)

[0.2.2] - 2019/02/27

Added

  • Better documentation and examples of API methods

Fixed

  • Fixed shadowing of built-in all function by translateChr()

[0.2.1] - 2019/02/25

Added

  • Added support for strandedness in tx2genome()

Fixed

  • Fixed bug in tx2genome() strand handling

[0.2.0] - 2019/01/19

Fixed

  • Improvements to the CLI messages
  • Major documentation rewrite

[0.1.2] - 2018/11/09

Added

  • Added --filterKey option to gtf2bed

Fixed

  • Fixed exception handling in tx2genome
  • Corrected off-by-one error in tx2genome
  • Added unit tests for tx2genome
  • Various documentation fixes

[0.1.1] - 2018/11/12

Added

  • Added --whichExon option to bed12tobed6

Fixed

  • Fixed a bug in bed12tobed6