fix(init): fix initialization scripts for out-of-box usage

- Add scripts/*.ts to esbuild so npm run init/status work
- Fix MCP server path to dist/integrations/mcp/server.js
- Fix MCP config path with platform detection (macOS vs Linux)
- Fix install.sh to delegate to real CLI instead of embedded shim
- Copy scripts/ and esbuild.config.js during global install
- Fix mcp:start script path in package.json
- Update status.ts to match actual database schema

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

Author: jonathanpeterwu

esbuild.config.js

@@ -3,10 +3,17 @@ import esbuild from 'esbuild';
 import { glob } from 'glob';
 
 // Get all TypeScript files except tests
-const entryPoints = glob.sync('src/**/*.ts', {
+const srcEntries = glob.sync('src/**/*.ts', {
   ignore: ['**/*.test.ts', '**/*.spec.ts', '**/__tests__/**'],
 });
 
+// Get script files
+const scriptEntries = glob.sync('scripts/*.ts', {
+  ignore: ['**/*.test.ts', '**/*.spec.ts'],
+});
+
+const entryPoints = [...srcEntries, ...scriptEntries];
+
 // ESM polyfill for __dirname and __filename
 const esmBanner = `import { fileURLToPath as __fileURLToPath } from 'url';
 import { dirname as __pathDirname } from 'path';

package.json

@@ -64,7 +64,7 @@
     "prepublishOnly": "npm run build && npm run test:pre-publish",
     "quality": "npm run lint && npm run test:run && npm run build",
     "dev": "tsx watch src/mcp/mcp-server.ts",
-    "mcp:start": "node dist/src/integrations/mcp/server.js",
+    "mcp:start": "node dist/integrations/mcp/server.js",
     "mcp:dev": "tsx src/mcp/mcp-server.ts",
     "status": "node dist/scripts/status.js",
     "linear:sync": "node scripts/sync-linear-graphql.js",

scripts/initialize.ts

@@ -83,19 +83,28 @@ if (!existsSync(jsonlPath)) {
 }
 
 // 5. Create MCP config for Claude Code
-const mcpConfigPath = join(
-  process.env['HOME'] || '~',
-  '.config',
-  'claude',
-  'mcp.json'
-);
+const isMacOS = process.platform === 'darwin';
+const mcpConfigPath = isMacOS
+  ? join(
+      process.env['HOME'] || '~',
+      'Library',
+      'Application Support',
+      'Claude',
+      'claude_desktop_config.json'
+    )
+  : join(
+      process.env['HOME'] || '~',
+      '.config',
+      'claude',
+      'claude_desktop_config.json'
+    );
 console.log(chalk.blue('\n📝 MCP Configuration for Claude Code:\n'));
 
 const mcpConfig = {
   mcpServers: {
     stackmemory: {
       command: 'node',
-      args: [join(projectRoot, 'dist', 'mcp-server.js')],
+      args: [join(projectRoot, 'dist', 'integrations', 'mcp', 'server.js')],
       env: {
         PROJECT_ROOT: projectRoot,
       },

scripts/install.sh

@@ -43,10 +43,12 @@ mkdir -p "$INSTALL_DIR"
 
 # Copy all necessary files
 cp -r "$CURRENT_DIR/src" "$INSTALL_DIR/" 2>/dev/null || true
-cp -r "$CURRENT_DIR/attention-scoring" "$INSTALL_DIR/" 2>/dev/null || true  
+cp -r "$CURRENT_DIR/scripts" "$INSTALL_DIR/" 2>/dev/null || true
+cp -r "$CURRENT_DIR/attention-scoring" "$INSTALL_DIR/" 2>/dev/null || true
 cp -r "$CURRENT_DIR/p2p-sync" "$INSTALL_DIR/" 2>/dev/null || true
 cp "$CURRENT_DIR/package.json" "$INSTALL_DIR/"
 cp "$CURRENT_DIR/tsconfig.json" "$INSTALL_DIR/"
+cp "$CURRENT_DIR/esbuild.config.js" "$INSTALL_DIR/"
 
 # 2. Install dependencies
 echo -e "${GREEN}[2/5]${NC} Installing dependencies..."
@@ -90,7 +92,7 @@ for CONFIG_DIR in "$MCP_CONFIG_DIR" "$ALT_MCP_DIR"; do
         
         config.mcpServers.stackmemory = {
             command: 'node',
-            args: ['$INSTALL_DIR/dist/src/mcp-server.js'],
+            args: ['$INSTALL_DIR/dist/integrations/mcp/server.js'],
             env: {
                 STACKMEMORY_GLOBAL: 'true'
             }
@@ -106,7 +108,7 @@ for CONFIG_DIR in "$MCP_CONFIG_DIR" "$ALT_MCP_DIR"; do
   "mcpServers": {
     "stackmemory": {
       "command": "node",
-      "args": ["$INSTALL_DIR/dist/src/mcp-server.js"],
+      "args": ["$INSTALL_DIR/dist/integrations/mcp/server.js"],
       "env": {
         "STACKMEMORY_GLOBAL": "true"
       }
@@ -124,75 +126,25 @@ echo -e "${GREEN}[5/5]${NC} Creating global command..."
 # Create bin directory if it doesn't exist
 mkdir -p "$HOME/.local/bin"
 
-# Create the global stackmemory command
+# Create the global stackmemory command - delegates to the real CLI
 cat > "$HOME/.local/bin/stackmemory" << 'EOF'
 #!/usr/bin/env node
 
 const { spawn } = require('child_process');
 const path = require('path');
-const fs = require('fs');
 const os = require('os');
 
 const installDir = path.join(os.homedir(), '.stackmemory');
-const mcpServer = path.join(installDir, 'dist', 'src', 'mcp-server.js');
-
-// Check if we're in a git repo
-function isGitRepo() {
-    try {
-        require('child_process').execSync('git rev-parse --git-dir', { stdio: 'ignore' });
-        return true;
-    } catch (e) {
-        return false;
-    }
-}
+const cliPath = path.join(installDir, 'dist', 'cli', 'index.js');
 
-// Auto-initialize if in git repo
-if (isGitRepo() && !fs.existsSync('.stackmemory')) {
-    console.log('🎯 Initializing StackMemory in this repository...');
-    
-    fs.mkdirSync('.stackmemory', { recursive: true });
-    
-    const config = {
-        projectId: path.basename(process.cwd()),
-        userId: process.env.USER || 'default',
-        initialized: new Date().toISOString()
-    };
-    
-    fs.writeFileSync('.stackmemory/config.json', JSON.stringify(config, null, 2));
-    fs.writeFileSync('.stackmemory/frames.jsonl', '');
-    
-    // Add to .gitignore
-    if (fs.existsSync('.gitignore')) {
-        const gitignore = fs.readFileSync('.gitignore', 'utf8');
-        if (!gitignore.includes('.stackmemory')) {
-            fs.appendFileSync('.gitignore', '\n# StackMemory\n.stackmemory/*.db\n.stackmemory/*.db-*\n');
-        }
-    }
-    
-    console.log('✅ StackMemory initialized!');
-}
+// Pass all arguments to the real CLI
+const args = process.argv.slice(2);
+const child = spawn('node', [cliPath, ...args], {
+    env: { ...process.env, PROJECT_ROOT: process.cwd() },
+    stdio: 'inherit'
+});
 
-// Handle commands
-const command = process.argv[2];
-
-switch(command) {
-    case 'init':
-        // Already handled above
-        break;
-    case 'status':
-        require(path.join(installDir, 'dist', 'scripts', 'status.js'));
-        break;
-    case 'test':
-        require(path.join(installDir, 'dist', 'test', 'test-framework.js'));
-        break;
-    default:
-        // Start MCP server
-        const child = spawn('node', [mcpServer], {
-            env: { ...process.env, PROJECT_ROOT: process.cwd() },
-            stdio: 'inherit'
-        });
-        child.on('exit', code => process.exit(code));
-}
+child.on('exit', code => process.exit(code || 0));
 EOF
 
 chmod +x "$HOME/.local/bin/stackmemory"