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_data/slides.yml

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external_url: https://docs.google.com/presentation/d/1qAh0vXmmFW0MtV5qKZhruxQNknNQnGItQ25Q0A1GX8Q/pub?start=false&loop=false&delayms=3000
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- title: Code and Tutorials
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folderitems:
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- title: Singularity @ POD (Penguin Computing)
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external_url: https://pod.penguincomputing.com/documentation/Singularity
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date: 5/2017
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- title: Singularity @ NIH Documentation
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external_url: https://hpc.nih.gov/apps/singularity.html
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date: 3/2017
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---
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title: "SingularityWare LLC on HPC Wire"
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category: news
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permalink: 2017-singularity-llc-hpcwire
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---
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Greg and the new SingularityWare LLC. were recently <a href="https://www.hpcwire.com/2017/05/04/singularity-hpc-container-technology-moves-lab/" target="_blank">featured on HPC Wire</a> to announce changes to the organizational infrastructure (and primarily, how not much is changing at all!) and exciting underway for Singularity. Who is <a href="http://www.storagenewsletter.com/2017/05/rstor-io-new-storage-start-up-in-stealth-mode/" target="_blank">RStor</a>? What is to come for Singularity? Excited to learn more? <a href="https://www.hpcwire.com/2017/05/04/singularity-hpc-container-technology-moves-lab/" target="_blank">Check out the post</a>.
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<img src="assets/img/people/gmk.jpg" style="width:250px">
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{% include links.html %}

_posts/news/2017-05-11-singularity-manuscript.md

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Singularity: Scientific containers for mobility of compute.
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PLoS ONE 12(5): e0177459. https://doi.org/10.1371/journal.pone.0177459
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```
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Woohoo!
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{% include links.html %}
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---
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title: "Penguin Computing Supports Singularity"
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category: news
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permalink: 2017-penguin-computing
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---
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Penguin Computing <a href="https://www.hpcwire.com/off-the-wire/penguin-computing-announces-support-singularity-containers-pod-hpc-cloud-scyld-clusterware-hpc-cluster-management-solution/" target="_blank">has announced</a> support for Singularity containers for it's HPC Cloud (Penguin Computing On-Demand) and Scyld ClusterWare HPC management software! They have started <a href="https://github.com/PenguinComputing/pod" target="_blank">a public Github repository</a> of specification files for images, and we are excited to see reproducibility coming to the resource.
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You can see their <a href="https://pod.penguincomputing.com/documentation/Singularity" target="_blank">documentation for Singularity containers</a> and to learn more about Penguin Computing,
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visit <a href="http://www.penguincomputing.com" target="_blank">Penguin Computing</a>.
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![/assets/img/posts/news/penguin-computing.png](/assets/img/posts/news/penguin-computing.png)
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Read about the details at the <a href="https://www.hpcwire.com/off-the-wire/penguin-computing-announces-support-singularity-containers-pod-hpc-cloud-scyld-clusterware-hpc-cluster-management-solution/" target="_blank">press release</a> on HPC Wire.
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{% include links.html %}
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---
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title: "The Next Platform: Singularity is the Hinge To Swing HPC Cloud Adoption"
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category: news
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permalink: 2017-nextplatform-singularity-hpc-cloud
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---
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<a href="https://www.nextplatform.com" target="_blank">The Next Platform</a> has written an article on how Singularity is enabling HPC based workflows to easily be transitioned to cloud based computing providers! <a href="http://pod.penguincomputing.com" target="_blank">Penguin Computing's POD service</a> is leveraging Singularity to help with the transition of local resources to cloud based resources.
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Read about the details in the original article here: <a href="https://www.nextplatform.com/2017/05/18/singularity-hinge-swing-hpc-cloud-adoption/" target="_blank">https://www.nextplatform.com/2017/05/18/singularity-hinge-swing-hpc-cloud-adoption/</a>
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{% include links.html %}

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pages/docs/user-docs/user-guide.md

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11. Bind mount points are setup
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12. The namespace `CLONE_FS` is used to virtualize a new root file system
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13. Singularity calls `execvp()` and Singularity process itself is replaced by the process inside the container
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14. When the process inside the container exists, all namespaces collapse with that process, leaving a clean system
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14. When the process inside the container exits, all namespaces collapse with that process, leaving a clean system
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All of the above steps take approximately 15-25 thousandths of a second to run, which is fast enough to seem instantaneous.
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pages/info/citation-registration.md

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### Citations
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Are you using Singularity for science? If so please help by citing using the referenced DOI for the most recent release: <a target="_blank" href="http://dx.doi.org/10.5281/zenodo.60736"><img src="https://zenodo.org/badge/doi/10.5281/zenodo.60736.svg" alt="10.5281/zenodo.60736"></a>, and please <a href="https://goo.gl/forms/tGBKnKwplNyRZRSm2" target="_blank">Register your Publication</a> so we can tell the world about your work!
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Are you using Singularity for science? If so please help by citing using <a href="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0177459" target="_blank">our publication</a>.
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```
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Kurtzer GM, Sochat V, Bauer MW (2017)
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Singularity: Scientific containers for mobility of compute.
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PLoS ONE 12(5): e0177459. https://doi.org/10.1371/journal.pone.0177459
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```
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And we have a Zenodo DOI for the most recent release: <a target="_blank" href="http://dx.doi.org/10.5281/zenodo.60736"><img src="https://zenodo.org/badge/doi/10.5281/zenodo.60736.svg" alt="10.5281/zenodo.60736"></a><br>
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Please <a href="https://goo.gl/forms/tGBKnKwplNyRZRSm2" target="_blank">Register your Publication</a> so we can tell the world about your work!
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### Clusters

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