From 78d00e3b21d95cc7d955b25f94fbb741bb77ee0d Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Mon, 24 Nov 2025 09:19:51 +0000
Subject: [PATCH] Bump actions/checkout from 5 to 6

Bumps [actions/checkout](https://github.com/actions/checkout) from 5 to 6.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](https://github.com/actions/checkout/compare/v5...v6)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-version: '6'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
---
 .github/workflows/ci_coverage.yml | 2 +-
 .github/workflows/ci_license.yml  | 2 +-
 .github/workflows/ci_linux.yml    | 2 +-
 .github/workflows/ci_macos.yml    | 2 +-
 .github/workflows/initialise.yml  | 2 +-
 .github/workflows/lint.yml        | 2 +-
 6 files changed, 6 insertions(+), 6 deletions(-)

diff --git a/.github/workflows/ci_coverage.yml b/.github/workflows/ci_coverage.yml
index 1631ca8..4bce0c3 100644
--- a/.github/workflows/ci_coverage.yml
+++ b/.github/workflows/ci_coverage.yml
@@ -34,7 +34,7 @@ jobs:
       image: ghcr.io/seqan/${{ matrix.compiler }}
     steps:
       - name: Checkout
-        uses: actions/checkout@v5
+        uses: actions/checkout@v6
 
       - name: Setup cache
         uses: seqan/actions/setup-actions-cache@main
diff --git a/.github/workflows/ci_license.yml b/.github/workflows/ci_license.yml
index 5929a72..8dbbab6 100644
--- a/.github/workflows/ci_license.yml
+++ b/.github/workflows/ci_license.yml
@@ -25,7 +25,7 @@ jobs:
     timeout-minutes: 5
     steps:
       - name: Checkout
-        uses: actions/checkout@v5
+        uses: actions/checkout@v6
 
       - name: REUSE Compliance Check
         continue-on-error: false # Set to true to not fail the build in case of non-compliance.
diff --git a/.github/workflows/ci_linux.yml b/.github/workflows/ci_linux.yml
index 43e84de..42c8a8c 100644
--- a/.github/workflows/ci_linux.yml
+++ b/.github/workflows/ci_linux.yml
@@ -34,7 +34,7 @@ jobs:
       image: ghcr.io/seqan/${{ matrix.compiler }}
     steps:
       - name: Checkout
-        uses: actions/checkout@v5
+        uses: actions/checkout@v6
 
       - name: Setup cache
         uses: seqan/actions/setup-actions-cache@main
diff --git a/.github/workflows/ci_macos.yml b/.github/workflows/ci_macos.yml
index a3dee5c..1e39c9a 100644
--- a/.github/workflows/ci_macos.yml
+++ b/.github/workflows/ci_macos.yml
@@ -32,7 +32,7 @@ jobs:
         compiler: ["clang-latest", "clang-second-latest", "clang-third-latest", "gcc-latest", "gcc-second-latest", "gcc-third-latest"]
     steps:
       - name: Checkout
-        uses: actions/checkout@v5
+        uses: actions/checkout@v6
 
       - name: Setup toolchain
         uses: seqan/actions/setup-toolchain@main
diff --git a/.github/workflows/initialise.yml b/.github/workflows/initialise.yml
index 6207b35..0e736fb 100644
--- a/.github/workflows/initialise.yml
+++ b/.github/workflows/initialise.yml
@@ -26,7 +26,7 @@ jobs:
       contents: write
     steps:
       - name: Checkout
-        uses: actions/checkout@v5
+        uses: actions/checkout@v6
 
       - name: Initialise
         run: |
diff --git a/.github/workflows/lint.yml b/.github/workflows/lint.yml
index 5ec0f48..c71bee7 100644
--- a/.github/workflows/lint.yml
+++ b/.github/workflows/lint.yml
@@ -24,7 +24,7 @@ jobs:
       pull-requests: write
     steps:
       - name: Checkout
-        uses: actions/checkout@v5
+        uses: actions/checkout@v6
 
       - name: Run clang-format
         uses: DoozyX/clang-format-lint-action@v0.20