subset an sce object by particular genotypes and boxplot/heatmap for the particular genotypes only

[junghpark]

I am exploring this package and having fun, thanks!

I subset my sce object (Seurat -> sce converted) for two genotypes out of four and want to show the t.test boxplot for only those two genotypes.

sce_subset <- sce[, sce$Genotype %in% c("geno1", "geno2")]

all_facts_boxes <- plot_context_boxplot(sce_subset,
sample_col = "ID",
group_col = "Genotype",
test="t.test",
paired=FALSE
)

So, the genotypes that were subset out are still being displayed in the plot. Same for heatmap. Is there any way to mask them? Also, the factor numbers are 1, "10", 2, 3... when they go over 10 for boxplot & heatmap.

Thank you!