TOF_Scatter/template_bin_EW.rec at master · rmapree/TOF_Scatter · GitHub

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###############################################################################
#       PARAMETER FILE FOR THE PHG BINNING MODULE
#       to be used with run_SimSET.sh
#       It uses the following strings which will be replaced by run_SimSET.sh:
#       OUTPUT_DIRECTORY
#
#       The particular binning module is created for the Siemens HR+ scanner
#
#       Author: Pablo Aguiar - University of Barcelona (Nov 2004)
#	Updated and added to the archive by Charalampos Tsoumpas
#
#
###############################################################################
# BINNING OPTIONS

# Energy bins ####
# Note: e2 is ignored for (SPECT)
INT     num_e1_bins             =       1
INT     num_e2_bins             =       1
REAL    min_e                   =       ALPHA
REAL    max_e                   =       600

# Scatter bin ####
# Scatter params = 0 for 1 scatter bin
# Scatter params = 1 for 2 scatter bins (primary vs all other [set min_s to 0])
# Scatter params = 2 for num scatter bins = (max_s - min_s + 1)
INT     scatter_param   =       1
INT     min_s           =       0
INT     max_s           =       1

# Z axis binning ####
# HR+ length is 15.52 with 32 rings
# Currently, z_Min has to start at -(ring_spacing)/2
INT     num_z_bins              =       12
REAL    min_z                   =       -0.654
REAL    max_z                   =       14.388


# Azimuthal angle bins ####
INT     num_aa_bins             =       144

# Transaxial binning.####
# NOTE: Take note if you are setting min_td and max_td to any value less than the radius of your object cylinder.
# num_td_bins needs to be odd for STIR, and the range needs to be symmetric
INT     num_td_bins             =       101
REAL    min_td                  =       -29.16815
REAL    max_td                  =        29.16815

#TOF info
INT num_tof_bins = 32
REAL min_tof = -2.541
REAL max_tof = 2.387

# Specification of output file data type ####
# Weight weight_image_type = 0 for two byte integers  (1 byte= 0..255 numero)
# Weight weight_image_type = 1 for four byte integers
# Weight weight_image_type = 2 for four byte reals
# Weight weight_image_type = 3 for 8 byte reals
# Needs to be 2 for STIR conversion to work
INT             weight_image_type       = 2

# Specification of output file data type
# Weight weight_image_type = 0 for one byte integers
# Weight weight_image_type = 1 for two byte integers
# Weight weight_image_type = 2 for four byte integers
# Needs to be 2 for STIR conversion to work
INT		count_image_type	= 2


# Flag to indicate whether or not to add to existing images
BOOL	add_to_existing_img = false

# Path to the binned values of photon weights
STR             weight_image_path 		= "OUTPUT_DIRECTORY/rec_minALPHA.weight"

# Path to the binned values of photon weights squared.
STR             weight_squared_image_path       = "OUTPUT_DIRECTORY/rec_minALPHA.weight2"

# Path to the binned values of absolute photons count
STR             count_image_path                = "OUTPUT_DIRECTORY/rec_minALPHA.count"

# Specify history file name for photons reaching the binning parameter
STR             history_file       = ""

# Specify history file parameter name for histogram history file
STR             history_params_file       = ""