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Chicken etc. genomes #11

@mccalluc

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@mccalluc

It looks like we're hard-coded for hg19 right now:

with open("data/input.json") as f:
config_data = json.loads(f.read())
tracks = []
assembly = "hg19"
url_base = "https://s3.amazonaws.com/data.cloud.refinery-platform.org/data/igv-reference/{}/".format(
assembly
)

but it shouldn't be hard to

  • upload genome reference files to s3
  • update this to actually read the input.json

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