diff --git a/.git-blame-ignore-revs b/.git-blame-ignore-revs index 4be937d47..23b86a4b8 100644 --- a/.git-blame-ignore-revs +++ b/.git-blame-ignore-revs @@ -3,3 +3,6 @@ # Scala Steward: Reformat with scalafmt 3.6.0 df858b0ea7cc4743ec9c78cee1486ad91de1dbd4 + +# Scala Steward: Reformat with scalafmt 3.8.0 +80ddbed8880d78e40d427408fa4a649a7096518b diff --git a/.scalafmt.conf b/.scalafmt.conf index ace08b0c3..caf971519 100644 --- a/.scalafmt.conf +++ b/.scalafmt.conf @@ -13,5 +13,5 @@ optIn.breakChainOnFirstMethodDot = false align.openParenDefnSite = false project.git = true assumeStandardLibraryStripMargin = true -version = 3.6.1 +version = 3.8.0 runner.dialect = scala213 diff --git a/modules/statistics/src/main/scala/de/proteinevolution/statistics/UserStatistic.scala b/modules/statistics/src/main/scala/de/proteinevolution/statistics/UserStatistic.scala index e69de29bb..8b1378917 100644 --- a/modules/statistics/src/main/scala/de/proteinevolution/statistics/UserStatistic.scala +++ b/modules/statistics/src/main/scala/de/proteinevolution/statistics/UserStatistic.scala @@ -0,0 +1 @@ + diff --git a/modules/tools/src/main/scala/de/proteinevolution/tools/parameters/ParamAccess.scala b/modules/tools/src/main/scala/de/proteinevolution/tools/parameters/ParamAccess.scala index 10e88669f..f1e4853d0 100644 --- a/modules/tools/src/main/scala/de/proteinevolution/tools/parameters/ParamAccess.scala +++ b/modules/tools/src/main/scala/de/proteinevolution/tools/parameters/ParamAccess.scala @@ -93,10 +93,10 @@ class ParamAccess @Inject() (tel: TEL) { case "COSINE_PERCENTILE_CUTOFF" => select("cosine_percentile_cutoff", default = Some("95")) case "ALIGNMENT_CUTOFF" => select("alignment_cutoff", default = Some("0.30")) case "WIN_LEN" => select("win_len", default = Some("10")) - case "MERGE_HITS" => select("merge_hits", default = Some("1")) - case "PLM_ALN_MODE" => select("plm_aln_mode", default = Some("False")) - case "SPAN" => select("span", default = Some("25")) - case "SIGMA_FACTOR" => select("sigma_factor", default = Some("2")) + case "MERGE_HITS" => select("merge_hits", default = Some("1")) + case "PLM_ALN_MODE" => select("plm_aln_mode", default = Some("False")) + case "SPAN" => select("span", default = Some("25")) + case "SIGMA_FACTOR" => select("sigma_factor", default = Some("2")) // HHpred case "TWOTEXTALIGNMENT" =>