gpredomics/CITATION.cff at main · predomics/gpredomics · GitHub

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cff-version: 1.2.0
message: "This tool is an adaptation of the Predomics method. If you use this software, please cite the original paper and this repository."

# --- Development of Gpredomics ---
authors:
  - family-names: "Lesage"
    given-names: "Louison"
    affiliation: "GMT Science"
    orcid: "https://orcid.org/0009-0000-0252-6311"
  - family-names: "de Lahondès"
    given-names: "Raynald"
    affiliation: "GMT Science"
    orcid: "https://orcid.org/0009-0000-2862-9589"
  - family-names: "Puller"
    given-names: "Vadim"
    affiliation: "GMT Science"
    orcid: "https://orcid.org/0000-0002-3900-8283"
  - family-names: "Prifti"
    given-names: "Edi"
    affiliation: "Institut de Recherche pour le Développement"
    orcid: "https://orcid.org/0000-0001-8861-1305"
title: "Gpredomics"
license: GPL-3.0
version: "1.0.0"
repository-code: "https://github.com/predomics/gpredomics"
date-released: 2025-12-19

keywords:
  - "metagenomics"
  - "machine-learning"
  - "prediction-models"
  - "interpretable-ai"
  - "bioinformatics"

# --- Original publication ---
preferred-citation:
  type: article
  authors:
    - family-names: "Prifti"
      given-names: "Edi"
      orcid: "https://orcid.org/0000-0001-8861-1305"
    - family-names: "Chevaleyre"
      given-names: "Yann"
    - family-names: "Hanczar"
      given-names: "Blaise"
    - family-names: "Belda"
      given-names: "Eugeni"
      orcid: "https://orcid.org/0000-0003-4307-5072"
    - family-names: "Danchin"
      given-names: "Antoine"
      orcid: "https://orcid.org/0000-0002-6350-5001"
    - family-names: "Clément"
      given-names: "Karine"
      orcid: "https://orcid.org/0000-0002-2489-3355"
    - family-names: "Zucker"
      given-names: "Jean-Daniel"
      orcid: "https://orcid.org/0000-0002-5597-7922"
  doi: "10.1093/gigascience/giaa010"
  journal: "GigaScience"
  title: "Interpretable and accurate prediction models for metagenomics data"
  year: 2020
  volume: 9
  issue: 3
  start: "giaa010"
  publisher:
    name: "Oxford University Press"