Hi, thanks for sharing the code.
I am able to reproduce good performance with the script, however, I get cell-type-specific GEPs with values ranging from 0 to 6. Is this normal? I thought I was supposed to get values on a min-max scale.
Below is the script:
CTE, Pred = Deconvolution(sc_ref, bulk, sep='\t',
datatype='counts', genelenfile=None,
mode='high-resolution', adaptive=True,
save_model_name = None)
Hi, thanks for sharing the code.
I am able to reproduce good performance with the script, however, I get cell-type-specific GEPs with values ranging from 0 to 6. Is this normal? I thought I was supposed to get values on a min-max scale.
Below is the script:
CTE, Pred = Deconvolution(sc_ref, bulk, sep='\t',
datatype='counts', genelenfile=None,
mode='high-resolution', adaptive=True,
save_model_name = None)