Merge pull request #4017 from plotly/release-5.12.0

version changes for v5.12.0

Author: nicolaskruchten

.circleci/config.yml

@@ -286,6 +286,7 @@ jobs:
             cd packages/python/plotly
             python setup.py sdist bdist_wheel
             cp -R dist ../../../output/dist
+            git status
 
       - run:
           name: Conda Build
@@ -295,6 +296,7 @@ jobs:
             cd packages/python/plotly
             conda build recipe/
             mv /opt/conda/envs/env/conda-bld/noarch/plotly*.tar.bz2 ../../../output
+            git status
 
       - run:
           name: NPM Pack
@@ -310,6 +312,12 @@ jobs:
           command: |
             tar czf output.tgz output
 
+      - run:
+          name: Git Diff
+          command: |
+            git status
+            git diff
+
       - store_artifacts:
           path: output.tgz
 

CHANGELOG.md

@@ -2,10 +2,10 @@
 All notable changes to this project will be documented in this file.
 This project adheres to [Semantic Versioning](http://semver.org/).
 
-## UNRELEASED
+## [5.12.0] - 2023-01-12
 
 ### Updated
-  - Support for ipywidgets 8 [#3930](https://github.com/plotly/plotly.py/pull/3930)
+  - Support for ipywidgets 8 [[#3930](https://github.com/plotly/plotly.py/pull/3930)]
   - Updated Plotly.js to from version 2.16.1 to version 2.17.1. See the [plotly.js CHANGELOG](https://github.com/plotly/plotly.js/blob/master/CHANGELOG.md#2170----2022-12-22) for more information. Notable changes include:
     - Add `shift` and `autoshift` to cartesian y axes to help avoid overlapping of multiple axes [[#6334](https://github.com/plotly/plotly.js/pull/6334)],
       with thanks to [Gamma Technologies](https://www.gtisoft.com) for sponsoring the related development!
@@ -16,6 +16,7 @@ This project adheres to [Semantic Versioning](http://semver.org/).
   - Fixed the usage of some deprecated NumPy types which were removed in NumPy 1.24 [[#3997](https://github.com/plotly/plotly.py/pull/3997)]
   - Fixed bug for trendlines with datetime axes [[#3683](https://github.com/plotly/plotly.py/issues/3683)]
   - `marker.angle` attribute now accepts iterables where appropriate [[#4013](https://github.com/plotly/plotly.py/issues/4013)]
+  - `selector=0` now correctly returns the first trace in `.select_traces()` and related methods [[#3817](https://github.com/plotly/plotly.py/issues/3817)]
 
 ## [5.11.0] - 2022-10-27
 

README.md

@@ -33,7 +33,7 @@
 
 ## Quickstart
 
-`pip install plotly==5.11.0`
+`pip install plotly==5.12.0`
 
 Inside [Jupyter](https://jupyter.org/install) (installable with `pip install "jupyterlab>=3" "ipywidgets>=7.6"`):
 
@@ -78,13 +78,13 @@ Built on top of [plotly.js](https://github.com/plotly/plotly.js), `plotly.py` is
 plotly.py may be installed using pip...
 
 ```
-pip install plotly==5.11.0
+pip install plotly==5.12.0
 ```
 
 or conda.
 
 ```
-conda install -c plotly plotly=5.11.0
+conda install -c plotly plotly=5.12.0
 ```
 
 ### JupyterLab Support
@@ -106,7 +106,7 @@ The instructions above apply to JupyterLab 3.x. **For JupyterLab 2 or earlier**,
 
 ```
 # JupyterLab 2.x renderer support
-jupyter labextension install jupyterlab-plotly@5.11.0 @jupyter-widgets/jupyterlab-manager
+jupyter labextension install jupyterlab-plotly@5.12.0 @jupyter-widgets/jupyterlab-manager
 ```
 
 Please check out our [Troubleshooting guide](https://plotly.com/python/troubleshooting/) if you run into any problems with JupyterLab.

doc/python/bio-alignment-chart.md

@@ -44,7 +44,7 @@ Note that the AlignmentChart only returns a chart of the sequence, while Alignme
 import plotly.express as px
 import pandas as pd
 
-df = (pd.read_csv('https://git.io/gene_conservation.csv')
+df = (pd.read_csv('https://raw.githubusercontent.com/plotly/datasets/master/Dash_Bio/Genetic/gene_conservation.csv')
         .set_index('0')
         .loc[['consensus','conservation']]
         .T

doc/python/bio-clustergram.md

@@ -40,7 +40,7 @@ import pandas as pd
 import dash_bio
 
 
-df = pd.read_csv('https://git.io/clustergram_brain_cancer.csv')
+df = pd.read_csv('https://raw.githubusercontent.com/plotly/datasets/master/Dash_Bio/Chromosomal/clustergram_brain_cancer.csv')
 
 dash_bio.Clustergram(
     data=df,
@@ -60,7 +60,7 @@ import pandas as pd
 import dash_bio
 
 
-df = pd.read_csv('https://git.io/clustergram_brain_cancer.csv')
+df = pd.read_csv('https://raw.githubusercontent.com/plotly/datasets/master/Dash_Bio/Chromosomal/clustergram_brain_cancer.csv')
 
 dash_bio.Clustergram(
     data=df,
@@ -86,7 +86,7 @@ import pandas as pd
 import dash_bio
 
 
-df = pd.read_csv('https://git.io/clustergram_brain_cancer.csv')
+df = pd.read_csv('https://raw.githubusercontent.com/plotly/datasets/master/Dash_Bio/Chromosomal/clustergram_brain_cancer.csv')
 
 dash_bio.Clustergram(
     data=df,

doc/python/bio-manhattanplot.md

@@ -41,7 +41,7 @@ import pandas as pd
 import dash_bio
 
 
-df = pd.read_csv('https://git.io/manhattan_data.csv')
+df = pd.read_csv('https://raw.githubusercontent.com/plotly/dash-bio-docs-files/master/manhattan_data.csv')
 
 
 dash_bio.ManhattanPlot(
@@ -57,7 +57,7 @@ import pandas as pd
 import dash_bio
 
 
-df = pd.read_csv('https://git.io/manhattan_data.csv')
+df = pd.read_csv('https://raw.githubusercontent.com/plotly/dash-bio-docs-files/master/manhattan_data.csv')
 
 dash_bio.ManhattanPlot(
     dataframe=df,

doc/python/bio-volcano-plot.md

@@ -41,7 +41,7 @@ import pandas as pd
 import dash_bio
 
 
-df = pd.read_csv('https://git.io/volcano_data1.csv')
+df = pd.read_csv('https://raw.githubusercontent.com/plotly/dash-bio-docs-files/master/volcano_data1.csv')
 
 dash_bio.VolcanoPlot(
     dataframe=df,
@@ -57,7 +57,7 @@ import pandas as pd
 import dash_bio
 
 
-df = pd.read_csv('https://git.io/volcano_data1.csv')
+df = pd.read_csv('https://raw.githubusercontent.com/plotly/dash-bio-docs-files/master/volcano_data1.csv')
 
 dash_bio.VolcanoPlot(
     dataframe=df,