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lines changed Original file line number Diff line number Diff line change @@ -506,7 +506,7 @@ def ecc_pipeline(name='eddy_correct'):
506506 return wf
507507
508508
509- def sdc_fmb (name = 'fmb_correction' ,
509+ def sdc_fmb (name = 'fmb_correction' , interp = 'Linear' ,
510510 fugue_params = dict (smooth3d = 2.0 )):
511511 """
512512 SDC stands for susceptibility distortion correction. FMB stands for
@@ -607,7 +607,7 @@ def sdc_fmb(name='fmb_correction',
607607 fmm2b0 .inputs .winsorize_upper_quantile = 0.995
608608
609609 applyxfm = pe .Node (ants .ApplyTransforms (
610- dimension = 3 , interpolation = 'BSpline' ), name = 'FMp_to_B0' )
610+ dimension = 3 , interpolation = interp ), name = 'FMp_to_B0' )
611611
612612 pre_fugue = pe .Node (fsl .FUGUE (save_fmap = True ), name = 'PreliminaryFugue' )
613613 demean = pe .Node (niu .Function (
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