fix: remove deprecated interface.

Author: satra

nipype/interfaces/fsl/__init__.py

@@ -8,7 +8,7 @@
 """
 
 from .base import (FSLCommand, Info, check_fsl, no_fsl, no_fsl_course_data)
-from .preprocess import (FAST, FLIRT, ApplyXfm, ApplyXFM, BET, MCFLIRT, FNIRT,
+from .preprocess import (FAST, FLIRT, pplyXFM, BET, MCFLIRT, FNIRT,
                          ApplyWarp, SliceTimer, SUSAN, PRELUDE, FUGUE, FIRST)
 from .model import (Level1Design, FEAT, FEATModel, FILMGLS, FEATRegister,
                     FLAMEO, ContrastMgr, MultipleRegressDesign, L2Model, SMM,

nipype/interfaces/fsl/preprocess.py

@@ -594,16 +594,6 @@ class ApplyXFM(FLIRT):
     """
     input_spec = ApplyXFMInputSpec
 
-class ApplyXfm(ApplyXFM):
-    """
-    .. deprecated:: 0.12.1
-       Use :py:class:`nipype.interfaces.fsl.ApplyXFM` instead
-    """
-    def __init__(self, **inputs):
-        super(ApplyXfm, self).__init__(**inputs)
-        warn(('This interface has been renamed since 0.12.1, please use '
-              'nipype.interfaces.fsl.ApplyXFM'),
-             UserWarning)
 
 class MCFLIRTInputSpec(FSLCommandInputSpec):
     in_file = File(exists=True, position=0, argstr="-in %s", mandatory=True,

nipype/interfaces/fsl/tests/test_auto_ApplyXfm.py

@@ -1,9 +1,9 @@
 # AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
 from __future__ import unicode_literals
-from ..preprocess import ApplyXfm
+from ..preprocess import ApplyXFM
 
 
-def test_ApplyXfm_inputs():
+def test_ApplyXFM_inputs():
     input_map = dict(angle_rep=dict(argstr='-anglerep %s',
     ),
     apply_isoxfm=dict(argstr='-applyisoxfm %f',
@@ -145,19 +145,19 @@ def test_ApplyXfm_inputs():
     min_ver='5.0.0',
     ),
     )
-    inputs = ApplyXfm.input_spec()
+    inputs = ApplyXFM.input_spec()
 
     for key, metadata in list(input_map.items()):
         for metakey, value in list(metadata.items()):
             assert getattr(inputs.traits()[key], metakey) == value
 
 
-def test_ApplyXfm_outputs():
+def test_ApplyXFM_outputs():
     output_map = dict(out_file=dict(),
     out_log=dict(),
     out_matrix_file=dict(),
     )
-    outputs = ApplyXfm.output_spec()
+    outputs = ApplyXFM.output_spec()
 
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):