Filepath - ./sourcedata/sub-ON05258/ses-01/anat/sub-ON05258_ses-01_acq-mprage_rec-scic_T1w.nii.gz
Verified that mapping file is correct for the filename and strangely the json sidecar for this scan's nifti has been renamed correctly. Unsure of the source of error yet but looks like a runtime bug.
Temporary fix:
Renaming the file manually with the following command
mv ./sourcedata/sub-ON05258/ses-01/anat/sub-ON05258_ses-01_acq-mprage_rec-scic_T1w.nii.gz ./sourcedata/sub-ON05258/ses-01/anat/sub-ON05258_ses-01_acq-MPRAGE_rec-SCIC_T1w.nii.gz
. == /data/BrainBlocks/joyce/dcm2bids_2022_07_08
Filepath -
./sourcedata/sub-ON05258/ses-01/anat/sub-ON05258_ses-01_acq-mprage_rec-scic_T1w.nii.gzVerified that mapping file is correct for the filename and strangely the json sidecar for this scan's nifti has been renamed correctly. Unsure of the source of error yet but looks like a runtime bug.
Temporary fix:
Renaming the file manually with the following command
.==/data/BrainBlocks/joyce/dcm2bids_2022_07_08