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Error: nextflow is not installed or not in PATH #233

@vinisalazar

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@vinisalazar

Hi,

I'm trying to migrate our pipeline to the new template of nf-core tools v4 and I'm getting this error in the pre-commit action:

https://github.com/nf-core/funcprofiler/actions/runs/25720776726/job/75521180249?pr=60#step:4:50

Error: nextflow is not installed or not in PATH

In the offending file, I found the following diff:

Image

Could this be a problem with this action?

Please let me know if there's any more information I could provide.

Thanks
Vini

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