Hi,
I'm trying to migrate our pipeline to the new template of nf-core tools v4 and I'm getting this error in the pre-commit action:
https://github.com/nf-core/funcprofiler/actions/runs/25720776726/job/75521180249?pr=60#step:4:50
Error: nextflow is not installed or not in PATH
In the offending file, I found the following diff:
Could this be a problem with this action?
Please let me know if there's any more information I could provide.
Thanks
Vini
Hi,
I'm trying to migrate our pipeline to the new template of nf-core tools v4 and I'm getting this error in the pre-commit action:
https://github.com/nf-core/funcprofiler/actions/runs/25720776726/job/75521180249?pr=60#step:4:50
Error: nextflow is not installed or not in PATHIn the offending file, I found the following diff:
Could this be a problem with this action?
Please let me know if there's any more information I could provide.
Thanks
Vini