seqinspector/modules.json at dev · nf-core/seqinspector · GitHub

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{
    "name": "nf-core/seqinspector",
    "homePage": "https://github.com/nf-core/seqinspector",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "bwamem2/index": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "bwamem2/mem": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "checkqc": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/checkqc/checkqc.diff"
                    },
                    "fastp": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/fastp/fastp.diff"
                    },
                    "fastqc": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/fastqc/fastqc.diff"
                    },
                    "fastqe": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/fastqe/fastqe.diff"
                    },
                    "fastqscreen/fastqscreen": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/fastqscreen/fastqscreen/fastqscreen-fastqscreen.diff"
                    },
                    "fq/lint": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/fq/lint/fq-lint.diff"
                    },
                    "kraken2/kraken2": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/kraken2/kraken2/kraken2-kraken2.diff"
                    },
                    "krona/ktimporttaxonomy": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/krona/ktimporttaxonomy/krona-ktimporttaxonomy.diff"
                    },
                    "krona/ktupdatetaxonomy": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "multiqc": {
                        "branch": "master",
                        "git_sha": "008f9d3e61209bf995edac3ba531f54e269e1215",
                        "installed_by": ["modules"]
                    },
                    "multiqcsav": {
                        "branch": "master",
                        "git_sha": "008f9d3e61209bf995edac3ba531f54e269e1215",
                        "installed_by": ["modules"]
                    },
                    "picard/collecthsmetrics": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/picard/collecthsmetrics/picard-collecthsmetrics.diff"
                    },
                    "picard/collectmultiplemetrics": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/picard/collectmultiplemetrics/picard-collectmultiplemetrics.diff"
                    },
                    "picard/createsequencedictionary": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "samtools/faidx": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "samtools/index": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "seqfu/stats": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/seqfu/stats/seqfu-stats.diff"
                    },
                    "seqtk/sample": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    },
                    "sequali": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/sequali/sequali.diff"
                    },
                    "toulligqc": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/toulligqc/toulligqc.diff"
                    },
                    "untar": {
                        "branch": "master",
                        "git_sha": "6d46786420b4d7bc88eba026eb389c0c5535d120",
                        "installed_by": ["modules"]
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "a3fb7351b1fdb2b1de282b765816bbea190e86a8",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfschema_plugin": {
                        "branch": "master",
                        "git_sha": "fdc08b8b1ae74f56686ce21f7ea11ad11990ce57",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}