Request
Instead of seeing downstream d or upstream u as separate regions, treat them as the last and the first intron of a sequence.
Example
_exons = [(5, 8), (14, 20), (30, 35), (40, 44), (50, 52), (70, 72)]
_cds = (32, 43)
Crossmapper should output the following coding positions for coordinate 4
{'position': 11, 'region': 'u', 'offset': -1}instead of
{'position': 1, 'region': 'u', 'offset': 0}
Request
Instead of seeing downstream
dor upstreamuas separate regions, treat them as the last and the first intron of a sequence.Example
Crossmapper should output the following coding positions for coordinate 4
{'position': 11, 'region': 'u', 'offset': -1}instead of
{'position': 1, 'region': 'u', 'offset': 0}