zika_ref.bib

@article{bonyah2017theoretical,
	author = {Bonyah, Ebenezer and Khan, Muhammad Altaf and Okosun, KO and Islam, Saeed},
	date-added = {2020-11-06 22:27:53 -0500},
	date-modified = {2020-11-06 22:27:53 -0500},
	journal = {PloS one},
	number = {10},
	pages = {e0185540},
	publisher = {Public Library of Science San Francisco, CA USA},
	title = {A theoretical model for Zika virus transmission},
	volume = {12},
	year = {2017}}
	
	@article{gao2016prevention,
  title={Prevention and control of Zika as a mosquito-borne and sexually transmitted disease: a mathematical modeling analysis},
  author={Gao, Daozhou and Lou, Yijun and He, Daihai and Porco, Travis C and Kuang, Yang and Chowell, Gerardo and Ruan, Shigui},
  journal={Scientific reports},
  volume={6},
  number={1},
  pages={1--10},
  year={2016},
  publisher={Nature Publishing Group}
}
@article{lowe2018zika,
  title={The Zika virus epidemic in Brazil: from discovery to future implications},
  author={Lowe, Rachel and Barcellos, Christovam and Brasil, Patr{\'\i}cia and Cruz, Oswaldo G and Hon{\'o}rio, Nildimar Alves and Kuper, Hannah and Carvalho, Marilia S{\'a}},
  journal={International journal of environmental research and public health},
  volume={15},
  number={1},
  pages={96},
  year={2018},
  publisher={Multidisciplinary Digital Publishing Institute}
}

@article{thomas2016quantifying,
  title={Quantifying the importance of spatial resolution and other factors through global sensitivity analysis of a flood inundation model},
  author={Thomas Steven Savage, James and Pianosi, Francesca and Bates, Paul and Freer, Jim and Wagener, Thorsten},
  journal={Water Resources Research},
  volume={52},
  number={11},
  pages={9146--9163},
  year={2016},
  publisher={Wiley Online Library}
}

@article{paixao2016history,
  title={History, epidemiology, and clinical manifestations of Zika: a systematic review},
  author={Paix{\~a}o, Enny S and Barreto, Florisneide and da Gl{\'o}ria Teixeira, Maria and da Concei{\c{c}}{\~a}o N. Costa, Maria and Rodrigues, Laura C},
  journal={American journal of public health},
  volume={106},
  number={4},
  pages={606--612},
  year={2016},
  publisher={American Public Health Association}
}

@article{da2017neurologic,
  title={Neurologic complications associated with the Zika virus in Brazilian adults},
  author={Da Silva, Ivan Rocha Ferreira and Frontera, Jennifer A and De Filippis, Ana Maria Bispo and Do Nascimento, Osvaldo Jose Moreira and RIO-GBS-ZIKV Research Group and others},
  journal={JAMA neurology},
  volume={74},
  number={10},
  pages={1190--1198},
  year={2017},
  publisher={American Medical Association}
}

@article{moreno2017role,
  title={Role of short-term dispersal on the dynamics of Zika virus in an extreme idealized environment},
  author={Moreno, Victor M and Espinoza, Baltazar and Bichara, Derdei and Holechek, Susan A and Castillo-Chavez, Carlos},
  journal={Infectious Disease Modelling},
  volume={2},
  number={1},
  pages={21--34},
  year={2017},
  publisher={Elsevier}
}

@article{suparit2018mathematical,
  title={A mathematical model for Zika virus transmission dynamics with a time-dependent mosquito biting rate},
  author={Suparit, Parinya and Wiratsudakul, Anuwat and Modchang, Charin},
  journal={Theoretical Biology and Medical Modelling},
  volume={15},
  number={1},
  pages={1--11},
  year={2018},
  publisher={BioMed Central}
}

@article{dantas2018calibration,
  title={Calibration of a SEIR--SEI epidemic model to describe the Zika virus outbreak in Brazil},
  author={Dantas, Eber and Tosin, Michel and Cunha Jr, Americo},
  journal={Applied Mathematics and Computation},
  volume={338},
  pages={249--259},
  year={2018},
  publisher={Elsevier}
}

@incollection{hernandez2018parameter,
  title={Parameter estimation in mathematical models of viral infections using R},
  author={Hernandez-Vargas, Esteban A and others},
  booktitle={Influenza Virus},
  pages={531--549},
  year={2018},
  publisher={Springer}
}

@article{overton2020using,
  title={Using statistics and mathematical modelling to understand infectious disease outbreaks: COVID-19 as an example},
  author={Overton, Christopher E and Stage, Helena B and Ahmad, Shazaad and Curran-Sebastian, Jacob and Dark, Paul and Das, Rajenki and Fearon, Elizabeth and Felton, Timothy and Fyles, Martyn and Gent, Nick and others},
  journal={Infectious Disease Modelling},
  volume={5},
  pages={409--441},
  year={2020},
  publisher={Elsevier}
}

@article{hoops2006copasi,
  title={COPASI—a complex pathway simulator},
  author={Hoops, Stefan and Sahle, Sven and Gauges, Ralph and Lee, Christine and Pahle, J{\"u}rgen and Simus, Natalia and Singhal, Mudita and Xu, Liang and Mendes, Pedro and Kummer, Ursula},
  journal={Bioinformatics},
  volume={22},
  number={24},
  pages={3067--3074},
  year={2006},
  publisher={Oxford University Press}
}

@article{bergmann2016piecewise,
  title={Piecewise parameter estimation for stochastic models in COPASI},
  author={Bergmann, Frank T and Sahle, Sven and Zimmer, Christoph},
  journal={Bioinformatics},
  volume={32},
  number={10},
  pages={1586--1588},
  year={2016},
  publisher={Oxford University Press}
}

@article{heukelbach2016zika,
  title={Zika virus outbreak in Brazil},
  author={Heukelbach, Jorg and Alencar, Carlos Henrique and Kelvin, Alyson Ann and de Oliveira, Wanderson Kleber and de G{\'o}es Cavalcanti, Luciano Pamplona},
  journal={The Journal of Infection in Developing Countries},
  volume={10},
  number={02},
  pages={116--120},
  year={2016}
}

@misc{data,
  title={ZIKA VIRUS - NOTIFICATIONS REGISTERED IN THE NOTIFIABLE DISEASES INFORMATION SYSTEM - BRAZIL},
  author= {{Ministry of Health/SVS - Notifiable Diseases Information System}},
  note = {\url{http://tabnet.datasus.gov.br/cgi/tabcgi.exe?sinannet/cnv/zikabr.def} [Accessed: 07/21/2021]},
  year = {2018}
  }