adding details on microbiorust-py

Author: LCrossman

.DS_Store

@@ -1,6 +1,6 @@
 # Welcome to micro**BioRust**
 
-A blazing-fast, sustainable bioinformatics toolkit written in [Rust](https://www.rust-lang.org/) — for microbial genomics rresearch, and optimised for functions used in data exploration.  
+A blazing-fast, sustainable bioinformatics toolkit written in [Rust](https://www.rust-lang.org/) — for microbial genomics research, and optimised for functions used in data exploration.  
 
 ---
 
@@ -14,7 +14,10 @@ A blazing-fast, sustainable bioinformatics toolkit written in [Rust](https://www
 
 ## Get Started!!
 See Installation for details on how to install Rust for Linux, MacOSX and Windows
-Interested in microbiorust-py?  Check out the microbiorust-py section for quick-start & more! 
+
+##Interested in microbiorust-py?##  Check out the microbiorust-py section for quick-start & more! 
+
+for microbiorust-py install with pip, no need to install Rust - see the microbiorust-py section
 
 Start a new project
 ```cargo new microBioRust_test```
@@ -29,7 +32,7 @@ to add the whole workspace including file parsing, sequence metrics, coming soon
 ```cargo add -p microbiorust-py```
 
 or clone the repo  
-```git clone https://github.com/LCrossman/microBioRust.git```
+```git clone https://github.com/microBioRust/microBioRust.git```
 
 Build the project  
 ```cargo build```

docs/.DS_Store

@@ -0,0 +1,46 @@
+
+For ease of use you can call directly from *Python* 
+
+No need to install Rust 
+
+Install microbiorust-py using pip:
+
+```pip install microbiorust```
+
+example script for converting from GenBank to protein fasta: 
+
+```
+from microbiorust import gbk_to_faa
+result = gbk_to_faa("filename.gbk") 
+for r in result:
+   print(r)
+```
+
+microbiorust-py contains the following features: 
+
+GenBank input:
+gbk_to_faa # converts gbk format to protein fasta
+gbk_to_fna # converts gbk format to DNA sequence contigs fasta
+gbk_to_ffn # converts gbk format to DNA gene sequence fasta
+gbk_to_gff # converts gbk format to GFF3
+gbk_to_faa_count # counts numbers of protein fasta converted from gbk 
+
+EMBL input: 
+embl_to_faa
+embl_to_fna
+embl_to_gff
+
+BLAST input:
+parse_tabular # streaming parse BLAST input as -outfmt 6 
+parse_XML # streaming BLAST parser for -outfmt 5
+
+Alignment input (MSA):
+subset_msa_alignment # subset the alignment by row and column
+get_consensus # get a consensus sequence for your MSA alignment
+
+Calculate sequence metrics:
+hydrophobicity
+amino_counts # counts of each amino acid in the provided sequence
+amino_percentage # percentage of each amino acid in the provided sequence
+
+