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When running DNFtrans, after reaching line 450 of the tracking part, an error report appears, even though it ran normally before. #103

@Samuel-Mjc

Description

@Samuel-Mjc

I'm certain that this isn't a hardware issue because I've encountered the same problem on different computers.

================================================================================

dfnTrans Starting

================================================================================
Attempting to Copy /home/mjc/PTDFN_control.dat

Checking that all files required for dfnTrans are in the current directory
--> Current Working Directory: /home/mjc/output
--> dfnTrans is running from: PTDFN_control.dat
--> Checking DFNTrans Parameters
--> All files required for dfnTrans have been found in current directory

--> Checking Initial Conditions
--> Checking Initial Conditions Complete
The input parameters are read from PTDFN_control.dat control file.

~~~ Program: DFNWorks / DFNTrans V1.0, C code, Linux ~~~~~~~~~~~~~
~~~~~~~~~~~~ April 1st, 2015.  LA-CC-14-091 ~~~~~~~~~~~~~~~~~~~~~~~~~

 This program was prepared at Los Alamos National Laboratory (LANL),
 Earth and Environmental Sciences Division, Computational Earth 
 Science Group (EES-16), Subsurface Flow and Transport Team.
 All rights in the program are reserved by the DOE and LANL.
 Permission is granted to the public to copy and use this software 
 without charge, provided that this Notice and any statement of 
 authorship are reproduced on all copies. Neither the U.S. Government 
 nor LANS makes any warranty, express or implied, or assumes 
 any liability or responsibility for the use of this software.
 Last update Apr. 1st, 2015, by N. Makedonska (nataliia@lanl.gov)

PROGRAM STARTS. current time: Tue Feb 18 10:06:32 2025

Particles velocities are calculated in [m/seconds].

All output files will be written in traj/
---------------------GRID DATA READING--------------------------

OPEN AND READ FILE: params.txt

Number of fractures in the domain = 319

OPEN AND READ AVS FILE: full_mesh.inp

Total number of nodes: 1329494, Total number of elements (triangles): 2732416

OPEN AND READ STOR FILE: full_mesh.stor

Total number of edges in Voronoy polygons = 9453534, total number of nodes = 1329494

Memory allocation is done successfully

OPEN AND READ FILE: poly_info.dat

OPEN AND READ FILE: full_mesh.inp

OPEN AND READ FILE: full_mesh.stor

OPEN AND READ FILE: aperture.dat

----------------FLOW SOLUTION DATA READING--------------------

PFLOTRAN: OPEN AND READ FILE: darcyvel.dat

PFLOTRAN: OPEN AND READ FILE: cellinfo.dat

Reading pressure
MAX pressure 1.90926600e+01 [MPa]; MIN pressure -5.54310100e+00 [MPa]

Data Reading is Done

---------------------BOUNDARY CONDITIONS----------------------

OPEN AND READ FILE: allboundaries.zone

Read the number and indices of nodes defined in flow in and flow out zones

Number of nodes 2542 in flow-in zone.

Number of nodes 2608 in flow-out zone.
Total in-flow volumetric flux = 2.43004e-02 [m^3/s]
Total out-flow volumetric flux = -2.39869e-02 [m^3/s]
GRID CHECK starts
GRID CHECK is done

Converting 3d nodes coordinates to 2d xy parallel plane

----------------VELOCITY RECONSTRUCTION-----------------------

Darcy's velocities reconstruction
Velocities on nodes are calculated

Output flow field: Darcy velocities on nodes in 3D

------------------PARTICLE TRACKING---------------------------

Fracture Intersection Rule: Complete Mixing

All output trajectory files will be written in traj/trajectories/
Note: if the directory exists all the files in it will be replaced.

Number of fractures in the in-flow boundary zone: 51

Particle Initial position option: init_eqd with init_npart: 40

Total Number of Particles: 2040
Number of Fractures: 51
Total Length of Fractures on Boundary: 202.448874 m
Particles will be placed with a spacing of 0.099240 [m]


Seeding 2013 particles
There are 2000000 time steps in the current run



Starting Main Loop on Particles


Segmentation fault (core dumped)
--> ERROR: dfnTrans did not complete

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