Making a publishable results table from a lot of Mantel tests

[lganley]

Hey everyone,
I'm working on a project that has required me to run a whole slew of Mantel tests in the ade4 package. Now, I would like to combine these results into a publishable table with the correlation coefficient and the p-value for each test I have run. For example, one set of tests is named mantel.1998.1999, the correlation coefficients are labeled as "Observation" in the output table from ade4. mantel.1998.1999$Observation returns a NULL. mantel.1998.1999$Simulated p-value returns an error.

I've been combing stack overflow for days, and this seems like a stupid problem to have. Any thoughts?

Thanks!
~Laura

[jebyrnes]

One thing to do would be to write a function that produces a single row of your table from any arbitrary mantel test object. Then out all of the objects into a list. Use lapply (or get fancy and use purrr's map function) with your function to produce a table.

On Nov 9, 2015, at 11:11 AM, lganley <notifications@github.commailto:notifications@github.com> wrote:

Hey everyone,
I'm working on a project that has required me to run a whole slew of Mantel tests in the ade4 package. Now, I would like to combine these results into a publishable table with the correlation coefficient and the p-value for each test I have run. For example, one set of tests is named mantel.1998.1999, the correlation coefficients are labeled as "Observation" in the output table from ade4. mantel.1998.1999$Observation returns a NULL. mantel.1998.1999$Simulated p-value returns an error.

I've been combing stack overflow for days, and this seems like a stupid problem to have. Any thoughts?

Thanks!
~Laura

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